Sodalis ligni: GTU79_05015
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Entry
GTU79_05015 CDS
T08321
Name
(GenBank) transcriptional regulator GcvA
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
slig
Sodalis ligni
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slig03000
]
GTU79_05015
Transcription factors [BR:
slig03000
]
Prokaryotic type
Helix-turn-helix
LysR family
GTU79_05015
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_5
Motif
Other DBs
NCBI-ProteinID:
QWA12128
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All DBs
Position
1076017..1076955
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AA seq
312 aa
AA seq
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MSKRLPPLNALRAFDAAARHLSFTKAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSL
LLTEEGQSYYLDIKEIFSDLADATRKLQSRSAKGALTVSLLPSFAIQWLVPRLSSFNAAW
PGIDVLIQAVDREEDKLADDVDVAIFYGRGNWPGLKVEKLYAEYLLPVCSPSLLSGLHPL
ASPADLIHHTLLHDASRRDWQAYTRQLGLTHINVQQGPIFSHSAMVLQAAIHGQGVALAN
NVMAQTEIEAGRLICPFNEVLVSKNAFYLVCHDSQAEVGKIAAFRQWIVGRAASEQEKFR
VRYNNGQTVEPQ
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgcttaccgccgctcaacgccttgcgggctttcgatgcggcagcgcgccat
ttgagctttaccaaagcggcggaagaactgttcgtaacccaggcggcggtcagccatcaa
atcaaatcgctggaggatttccttgggcttaagctgtttcgccggcgcaaccgttcgctg
ctgctgacggaagagggtcagagttattaccttgatataaaagagattttttctgatctg
gctgacgctacccgtaaactgcagtctcgcagcgcgaaaggcgcgctcaccgtcagtcta
ttacccagcttcgctattcagtggctggtgccgcggctgtccagttttaatgccgcctgg
ccgggcatcgacgtgctgatccaggcggtggatcgcgaggaagacaagctggcggacgac
gtggatgtggcgatattttacgggcgcggcaactggccggggctcaaggtggagaaactc
tatgccgagtatcttttaccggtgtgctcgccgtcactgctcagcggcctgcatccgctg
gcctccccggcggatttgattcatcacaccctcttgcacgatgcttcgcgccgggactgg
caggcttatacccgccagttggggctgacgcacatcaacgttcagcaggggccgattttc
agccacagcgccatggtcttgcaggcggcgatccacggtcagggcgttgccttggcaaat
aacgtcatggcgcagaccgagatagaagcaggcaggcttatctgccccttcaacgaagtg
ctggtaagtaaaaacgctttttatctggtttgtcatgacagccaggctgaagtaggtaaa
atagccgcctttcgtcagtggatagtcgggcgtgccgccagcgagcaggaaaaattccgg
gtccgttacaataacggccagacagtcgaaccacaataa
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