KEGG   Sodalis ligni: GTU79_05385
Entry
GTU79_05385       CDS       T08321                                 
Symbol
nrdE
Name
(GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
slig  Sodalis ligni
Pathway
slig00230  Purine metabolism
slig00240  Pyrimidine metabolism
slig01100  Metabolic pathways
slig01232  Nucleotide metabolism
Module
slig_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
slig_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:slig00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    GTU79_05385 (nrdE)
   00240 Pyrimidine metabolism
    GTU79_05385 (nrdE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slig03400]
    GTU79_05385 (nrdE)
Enzymes [BR:slig01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     GTU79_05385 (nrdE)
DNA repair and recombination proteins [BR:slig03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    GTU79_05385 (nrdE)
SSDB
Motif
Pfam: Ribonuc_red_lgC RNR_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: QWA12194
LinkDB
Position
complement(1156564..1158714)
AA seq 716 aa
MATTELNITRPGPELADYHALNAMLNLYDSEGKIQFHKDRQAIDCYLQQHVIPNSRRFPS
PAARLDALVAEGYYEAGVLAPYSAGFIAELYQRADAHHFRFQTFMGALKFYTGYALKTFD
GRHYLERYEDRVCMVALTLAAGDGALAVRLMEEMMTGRFQPATPTFLNCGKQQRGEYVSC
FLLRIEDNMESIGRSVNAALQLSKRGGGVAFMLTNLREAGAPIKRIENQSSGVIPVMKML
EDAFSYANQLGARQGAGAVYLHAHHPDIMRFLDTKRENADEKIRIKTLSLGVVIPDITFE
LARDNRPMYLFSPYDVERVYGAPFSQLNISEKYHEMAADSRIRKTAVNARQFFQTLAEIQ
FESGYPYMVFEDTVNRANPIAGRINMSNLCSEILQVNSATLYNEDLSYREVGKDISCNLG
SLNIARTMDSPDFSNTVETAVRGLTAVSDMSRIASVPSIVKGNDESHAIGLGQMNLHGYL
AREHIYYGSEEGVDFTNIYFYTVTYHALRASNRLAIERGKAFSGFGDSRYASGEYFRPYL
EQVWQPQTERVRSLFAGAGIALPGREEWLALRDSVMAHGLYNQNLQAVPPTGSISYINHS
TSSIHPIVSPIEIRKEGKTGRVYYPAPYMDNDNLQYFQDAYEIGPEKIIDTYAAATRHVD
QGLSLTLFFRDTATTRDINKAQIYAWKKGIKTLYYIRIRQLALEGTEVAGCVSCAL
NT seq 2151 nt   +upstreamnt  +downstreamnt
ttggcaacgacagaactgaacatcacccgccccggtccggaactggcggattatcatgct
ttaaacgccatgctgaatctgtatgactcggaaggcaagatacaattccataaagatcgc
caggccatagactgctacctacagcagcatgtcatccccaacagccggcggtttccgtcg
cccgcggccaggttggacgccctggtggcggaaggttattacgaagcgggagtactggcg
ccctactccgctggatttatcgccgagctgtaccaacgggcggatgcgcaccatttccgt
ttccagacctttatgggagccctgaagttctacaccggttatgccctgaaaacctttgac
ggccggcactatctcgaacgttatgaagaccgggtctgcatggtggcgctgaccctggcc
gccggcgacggcgccctggccgtccgcttgatggaagagatgatgaccggccgcttccag
cccgccacgccgacctttctcaactgcggcaaacagcagcgcggggaatatgtctcctgt
ttcctgctgcgcatcgaagacaatatggaatccatcggccgctcggtcaatgcggcgctg
cagctgtcgaaacgcggcggcggcgtggcgtttatgctcaccaacctgcgggaagcgggg
gcgcccatcaaacgcattgaaaaccagtcttccggagtgatcccggtgatgaaaatgctg
gaagacgccttttcctatgccaatcagctgggggcgcgccagggcgccggcgcggtctat
ctccatgcccaccaccccgatatcatgcgctttctcgataccaagcgggaaaacgccgat
gaaaaaatccgcatcaaaaccctgtccctgggcgtggtcatccccgatatcacatttgaa
ctggcgcgtgacaaccgcccgatgtatctgttttctccctatgacgtggaacgggtctat
ggcgcgccattttcccagctcaatatcagcgagaaataccatgagatggcggcggacagc
cgcatccgcaaaaccgccgtcaacgcccggcagtttttccagaccctggcggagatccag
ttcgaatccggttatccttatatggttttcgaggatacggttaaccgcgccaaccccatc
gccggccggatcaatatgagcaacctctgttcggagatcctgcaggtgaacagcgccacg
ctttacaatgaggatttaagctaccgcgaggtgggcaaggatatttcctgtaacctcggt
tcgctgaatatcgcccgcaccatggattcgccggatttcagcaatacggtggaaaccgcc
gtgcgcggcttaaccgcagtgtcggacatgagccggatcgcttccgttccctccattgtc
aaaggcaatgacgaatcccatgccatcggtttggggcaaatgaatctgcacggctacctg
gcgcgggaacatatttactacggttccgaagaaggggtggattttaccaatatctatttt
tataccgtgacctatcatgccctgcgggcctccaaccggctggccattgaacgggggaag
gcgttcagcggcttcggcgattcccgttatgcttccggcgagtactttcgtccttacctg
gagcaggtttggcaaccgcaaacggaacgggtgagaagtttattcgccggcgccggcatc
gccctgccgggccgcgaggagtggctggccctgcgtgactcggtgatggcgcacgggttg
tataaccaaaacttgcaggcggtgcctcccaccggctctatctcttacattaatcattcc
acctccagcatccatcccatcgtgtctcccatcgagatccgcaaggagggcaagaccgga
cgggtctattatccggccccctatatggataacgacaatctgcagtatttccaggacgcc
tatgagatcgggccggaaaaaattatcgacacctacgccgccgccacgcggcatgtggat
cagggcctgtcgctgacgctgtttttccgtgataccgccaccactcgggatatcaacaag
gcgcagatctatgcctggaaaaaaggcatcaagacgctgtattacatccgcatccgtcag
ttggcgctggaggggacggaagtcgccggctgcgtctcctgcgcactgtaa

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