Sodalis ligni: GTU79_07320
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Entry
GTU79_07320 CDS
T08321
Symbol
dacA
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase DacA
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
slig
Sodalis ligni
Pathway
slig00550
Peptidoglycan biosynthesis
slig01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GTU79_07320 (dacA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
slig01002
]
GTU79_07320 (dacA)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
slig01011
]
GTU79_07320 (dacA)
Enzymes [BR:
slig01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GTU79_07320 (dacA)
Peptidases and inhibitors [BR:
slig01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
GTU79_07320 (dacA)
Peptidoglycan biosynthesis and degradation proteins [BR:
slig01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
GTU79_07320 (dacA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
QWA12537
LinkDB
All DBs
Position
complement(1561620..1562831)
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AA seq
403 aa
AA seq
DB search
MNKEMTHLLFKRLALSTVIALIPLAHGQADDVNLKTMIPGVPQIDAESYILIDYNSGKVL
AEQNADSRRDPASLTKMMTSYVIGQAIKAGKISPNDVVTVNKDAWATGNPVFKGSSLMFL
KPGDRVPVALLNRGIILQSGNDACVAMADFVAGSQDAFVSLMNNYVTALGLPNTHFETVH
GLDAPGQFSSARDMAMIGKALIRDVPDEYATYKEREFTFNNIRQLNRNGLLWDTNLNVDG
IKTGHTDSAGFNLVASATDGPTRLISAVMGGHSPKGRENETRKLLTWGFRFFETVAPLKA
GKEFASEPVWFGDTDIVKLGVDKDAYLTIPRGRMKDLKASYTLDKTELHAPLALNQQVGT
INFQLDGKIIDQHPLVVLNEVKEGNIFSRMVDYIKLMFHHWFA
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaaatgacccaccttttattcaagcgcttagcgttaagtaccgtcattgcg
ttgatccccctggcccacggccaggcggatgatgtgaatctcaagaccatgattcccggc
gtaccgcaaattgatgctgaatcctatatcctgattgattacaactccggcaaggtattg
gcggagcagaatgccgacagccggcgcgatccggccagtctgaccaaaatgatgaccagt
tatgtcatcggccaggcgatcaaggcgggcaaaatctcccccaacgacgtcgtcaccgtg
aataaggatgcttgggcgaccggtaacccggtatttaaaggttcgtcattgatgttcctc
aaaccgggggatcgcgtccctgtggctctgttaaaccgggggatcatccttcagtcgggc
aatgacgcctgcgttgccatggcggattttgtcgccggcagccaggatgcctttgtcagc
ctgatgaataattacgtcaccgccctgggcctgcccaatacgcattttgagacggtgcac
ggtctcgacgcgccgggccagttcagctccgcccgggatatggcgatgatcggcaaagcg
ctcatccgcgacgtgccggatgagtatgccacctataaagaacgggaatttaccttcaac
aatatccgtcaattgaaccgtaacggtttattgtgggataccaatttgaacgtggacggt
atcaaaaccggccatacggattccgccggtttcaacctggtggcttcagccaccgacggc
ccgacgcggctgatttccgcggtgatgggcggccattccccgaagggacgtgaaaacgaa
acccgcaaattgctgacctgggggttccgtttcttcgaaaccgtggcgccgctgaaagcc
ggtaaagaatttgcctccgagccggtctggttcggcgataccgatattgtcaagctgggc
gtggataaagatgcctatctcaccattccccgcggacgcatgaaagatctgaaagccagc
tatacccttgacaagaccgagctgcacgcgccgctggccctgaatcagcaggtgggcacc
atcaattttcagctcgatggaaagattatcgatcagcaccccctggtggtactgaatgaa
gttaaagaaggcaatatcttcagccggatggtggattatatcaaactgatgttccaccac
tggttcgcgtaa
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