Sodalis ligni: GTU79_07485
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Entry
GTU79_07485 CDS
T08321
Name
(GenBank) ROK family transcriptional regulator
KO
K02565
N-acetylglucosamine repressor
Organism
slig
Sodalis ligni
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slig03000
]
GTU79_07485
Transcription factors [BR:
slig03000
]
Prokaryotic type
Other transcription factors
Others
GTU79_07485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ROK
MarR
HTH_24
Fe_dep_repress
MarR_2
HTH_IclR
HTH_Crp_2
TrmB
Motif
Other DBs
NCBI-ProteinID:
QWA12559
LinkDB
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Position
complement(1590701..1591924)
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AA seq
407 aa
AA seq
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MTPGGQAPIGNVDLVKQLNGAAVYRLIDQSGPISRIQIAEQSQLAPASITKITRQLLERG
LIREVDQQASTGGRRAISIVAETRAFQAIGIRLGRHDTTITLYDLTGKSLCEEYVPLPER
TQQALEEALFTAIGRFLEQSQRKIRELIAISVILPGLVDPYSGVVRYMPHITVNQWPLVE
NLQKRFHLTAFVGHDIRSLALAEHYFGASRDCDDSILVRLHRGTGAGILVNGQIFLGSNG
NVGEIGHIQVDPLGERCHCGNFGCLETIAANGAIEQRVRHLLNQGYPSKLTLDNCQIDAI
CKAANRGDPLACEVIEQVGHHLGKVIAIAINLFNPQKVVLAGEITEAHKVLLPAVQRCID
NQTLSGFRQNLPVVISALNHGSAIGAFALVKRAMLNGVLLQRLLEGN
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaccccaggcggacaggccccgataggtaatgttgatcttgtaaaacaacttaatggc
gcggcggtctaccgcctgatagaccaatcaggtccgatatcgcgcattcagatagcggaa
cagagtcagctggcgccggccagcatcaccaagattacccgccagctgctggaacgcggc
ctgatccgcgaagtggatcaacaggcctccaccggcggccgccgggcaatctccatcgtt
gccgaaacccgcgcctttcaggccatcggcattcgcctgggccgtcacgacacgaccatc
accctgtatgatctcaccggcaaatccctgtgcgaagagtatgtgccgctgcctgagcgg
acccagcaggcgctggaagaggcgctgtttaccgccatcggccgttttctggaacaaagc
cagcgcaagatccgtgagctcattgccatttcggtgattctgccgggcctggtggatccc
tattccggcgtggtgcgctatatgccgcatatcaccgtcaatcagtggcctctggtggaa
aatttacaaaagcggttccatttaaccgcttttgtcggccacgacatccgcagtttggcg
ctggcggagcactattttggtgcatcccgtgactgcgatgactccattttggttcgtttg
caccgcggcaccggtgcgggcatcctggtgaatggccagatttttctcggcagtaacggc
aacgtgggggaaatcggtcatatccaggtagacccgcttggagagcggtgccactgcggc
aactttggctgtctggaaaccattgccgccaacggcgccatcgaacaacgggtacggcat
ttgctcaaccagggctacccgagcaagctcactctagacaattgccagattgacgccatt
tgcaaagccgccaaccgtggcgaccctttggcatgcgaggtcatcgagcaggtgggacat
catcttggcaaggtgatcgccatcgccatcaacctgttcaatccgcaaaaagtggtgctg
gccggtgaaattaccgaagcgcataaagtcctgctgcctgcggtgcagcgctgcattgat
aaccagactctcagcggtttccggcaaaatctgccggtggtgatttccgcgctgaaccac
ggctcggccatcggcgcctttgccctggtgaaacgggccatgctcaacggcgtactgctg
caacgcttgctggaaggcaactaa
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