Sodalis ligni: GTU79_07530
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Entry
GTU79_07530 CDS
T08321
Symbol
alsB
Name
(GenBank) D-allose transporter substrate-binding protein
KO
K10549
D-allose transport system substrate-binding protein
Organism
slig
Sodalis ligni
Pathway
slig02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GTU79_07530 (alsB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slig02000
]
GTU79_07530 (alsB)
Transporters [BR:
slig02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Allose transporter
GTU79_07530 (alsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
QWA12566
LinkDB
All DBs
Position
complement(1602531..1603469)
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AA seq
312 aa
AA seq
DB search
MNKFIKFVGSAACGLMLSTVAARAAADYAVVLKTLSNPYWVEMKQGVEQKAKELGVTVDI
FASPSEGDFQSQLQLFEDLTNKNYKGIAFAPLSSVNLVIPVAKAYQQGIHLVNLDEKIDM
DSLTKAKGNVEAFITTDNVTVGASAAKYIIGKLGKDGGDVAIIEGKAGNASGESRRVGAT
QAFKADSNIKLVASQPADWDRIKALDVATNVLQRNPKLKAFYCANDTMAMGVAQAVANAG
QTGHILVVGTDGVPEARKMVSEGMMTATVAQNPAEIGANGLAILVDSVKSGKLIALNAQP
KIVTVDSILVTK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattcattaaatttgtcggcagtgcggcctgcgggttgatgttgtccaccgtg
gcggcccgggcggcagccgattacgccgtcgtattgaaaaccctgtccaatccttattgg
gtggaaatgaaacaaggcgttgagcaaaaggcaaaggagctgggtgtaaccgtcgatatt
ttcgcatcaccctccgagggggattttcaatcgcaattacagttgttcgaggatttgacc
aataaaaattataaaggcatcgcctttgcgcctttatcttcggtaaacctggttatcccg
gtggccaaggcttatcagcaaggcattcacctggtgaatctcgatgaaaaaatcgatatg
gacagcctcaccaaagccaaaggcaacgtggaagccttcattaccactgataacgttacc
gtcggcgccagcgcggccaaatacattattggcaaactgggtaaagacggcggcgacgtg
gccattattgaaggcaaggccggcaatgcttccggtgaatcgcgccgtgtcggcgccacc
caagcgttcaaagccgacagcaatatcaaactggtcgccagccagccggcggattgggat
cgcatcaaggcgctggatgtcgccaccaatgtcctgcagcgtaatcccaagctcaaggcg
ttttactgcgctaacgataccatggcaatgggggtagcccaggcggtggccaatgccgga
caaaccggacatatcctggtggtgggcaccgacggggtgccggaagcccgtaagatggtt
tccgagggaatgatgaccgccaccgtggcgcaaaacccggcggaaatcggcgccaacggc
ctagctattttggtggactcggttaaatccggaaagctgatagcattgaatgcccagcct
aaaattgtcaccgtggattcaatattagtgacgaaataa
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