Sodalis ligni: GTU79_07605
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Entry
GTU79_07605 CDS
T08321
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
slig
Sodalis ligni
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slig03400
]
GTU79_07605 (phrB)
Enzymes [BR:
slig01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GTU79_07605 (phrB)
DNA repair and recombination proteins [BR:
slig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GTU79_07605 (phrB)
Prokaryotic type
GTU79_07605 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Glyco_transf_17
Motif
Other DBs
NCBI-ProteinID:
QWA12576
LinkDB
All DBs
Position
1617082..1618524
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AA seq
480 aa
AA seq
DB search
MKNHIVWLRNDLRIHANPALSAACSRPDARVTALFIATPGQWRAHDMSPRQADFLYRNLI
ELRRALADRGILLHYHQCDDYVAAAAWLADFCRQRQADALFYNYQYEYNERLRDRAVEQA
LDGHVICQGFDDGVLLPPGSVTTGDGDMYKVFTPFRAAFIRRLRTEDPHCLPAPARRDAT
PQDPIDELVPFDYPRRETEGYPAGEEAALSRLRDFCHERLQGYSLGRNQPALDATSRLSA
YLTLGILSPVQCYNRLRTACPIVLDQADSGAFSWLNELIWRDFYRHIMVFYPDVCRHRPF
VAWTRHVAWRRDESLLTAWQQGRTGFPIVDAAMRQLNETGWMHNRLRMICASFLVKDLLI
DWREGERYFMRRLIDGDLSANNGGWQWAASTGTDAAPYFRIFNPATQGRRFDEQGRFIRR
WLPELASVPDKFLHEPYIWPLAEQTGLDYPRPIVDHGQARQSALAAYQAAKAQNSAPSPG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaccatatcgtctggctgcgaaacgatttacgcatccatgccaatccggcttta
tcagccgcctgttcccggccggacgcacgggtgaccgcattgtttatcgcgacgccggga
caatggcgagcccatgacatgtcgccccgtcaggcagattttctgtaccgcaatctcatc
gaactgcggcgtgccctggcggatcgcggtattctcctgcattaccatcaatgtgacgat
tatgttgccgcggcggcctggctggcggatttttgccgtcagcggcaagcggatgcattg
ttttataattatcaatatgaatataacgagcgcctgcgcgaccgggcggtagagcaggcc
ctcgacggccatgtgatatgtcagggattcgacgacggcgtgctgctgccgccggggagc
gtcaccaccggcgatggggatatgtacaaagtatttaccccttttcgcgccgcctttatc
cggcggctgagaaccgaagaccctcactgtctgccggcgccggcgcgccgcgacgcaact
ccccaagatccgattgacgaattggtgcctttcgattacccgcgccgggagaccgagggt
taccccgccggcgaagaggccgcgttatcccgtttgcgcgacttttgccatgaacggctg
cagggctattcccttggaaggaaccagcccgccctggacgccaccagccggctgtccgcc
tacctcactctggggatattgtcgccggtacagtgctacaaccggctgcgcaccgcctgc
ccgatagtgctggatcaggccgacagcggggcattcagctggctgaatgaattgatctgg
cgggatttttaccgtcacatcatggttttttatcccgacgtgtgccggcaccgtcccttt
gtcgcctggacccgccatgtggcctggcggcgggatgagtccttgctgaccgcctggcaa
cagggccgcaccggttttcctatcgtggatgccgccatgcgccagttgaacgagaccggc
tggatgcataatcgtctgcgcatgatctgcgccagttttttggtgaaggatttattgatt
gattggcgggagggagagcgctatttcatgcgccggttaatcgacggcgacctgtcggca
aataacggcggctggcaatgggccgcctccaccggcaccgatgccgcgccctatttccgt
attttcaaccccgccacccaggggcgccggtttgatgaacagggccggtttatacggcgc
tggctgccggaactggcgtccgtgccggataaatttctccatgaaccctatatttggcct
ctggccgagcaaaccggactggattatccgcggccgatcgttgatcatggacaggcacgt
caatccgccctggcggcttatcaagcggccaaagcacaaaattcggctccctcccctggg
tag
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