Sodalis ligni: GTU79_08160
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Entry
GTU79_08160 CDS
T08321
Symbol
ybiO
Name
(GenBank) mechanosensitive channel protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
slig
Sodalis ligni
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slig02000
]
GTU79_08160 (ybiO)
Transporters [BR:
slig02000
]
Other transporters
Pores ion channels [TC:
1
]
GTU79_08160 (ybiO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_TM1
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
QWA13851
LinkDB
All DBs
Position
complement(1729999..1732242)
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AA seq
747 aa
AA seq
DB search
MPSLHAASLPYLSKLTAGAAPATPAAPTAAAPSANGNPPSPADEKAAYAALADILNNDAA
RTELIKQLRAAAQGQPSQAAPLLAPADEEKDTPTLLDSVTDITRFYSHAMAAKLNTLSKN
ITSAPQHTFNRAVFMLALSRFALLSVATFAFYFFCRWLVTPLLHRLGRWGHTANDKYKSG
VKRISAVFGAFAVEMIILLAAVMLGQFLTEYLNADSRTIARQLSLFLNAFAVMELFKTLL
RMIFCPRYPELRRLPMSDKSARYWNHRLSLVSGFIGYSAMVIVPIIANQINTQTAALVNF
IIMLATTAYVLWLIVRNKRNIQKELEQFANRSLAFFSVFIRAFSLIWHWLAVAYFVMLFL
LTQFDPGNSLKFMVTATVKSLMIISVGALISGLLTRWISRHITLSPDARRNYPQLQQRLN
VYVSSALKICRVLVVFAVMLLLLDAWHLFNLRNWLTGNFGARIVDALLRIFIILIFSALG
WTLLASIIENRLATDAHGRPQPSARTRTLLTLFRNALSVIISTITIMIILSEIGVNIAPL
LAGAGALGLAISFGAQTLVKDVITGVFIQFENGMNTGDLVTIGDITGVVERMTIRSVGVR
QDTGAYFIIPFSSITTFANFVRGIGSFVANYDVNRDEDIDRVNQALRDAVTELMSKEDIR
PMVIGEPNFGGVVGLTNQSFTVRVSFTTQALKQWTVRFTLDGLVKNHFEAAGIRPPYQAV
QIISAAATRNNVHEAANDGLPPPAPNA
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgcttcacgcggcctctttgccctacctttcaaaactcaccgccggcgccgct
ccggcgacaccagcggcaccgaccgccgccgcgccctccgccaacggcaacccgccgagt
ccggcggatgaaaaagctgcttacgccgccctggcggatatccttaataacgacgccgcc
cgaacggagcttatcaaacagctgcgtgccgccgcccaaggccagcccagccaggccgcc
cccttactggcccccgctgatgaagaaaaggacaccccgacgctattggacagcgtaacc
gacattacgcgcttttacagccacgccatggcggcgaagctgaacaccttaagcaaaaat
atcacctcggcgccacagcatacgtttaaccgggcggtgtttatgctggccttgagccgg
ttcgctctgttgtccgtcgccaccttcgccttttattttttctgccggtggctcgttacc
ccgctgctgcaccggctgggccggtggggtcatactgccaatgataaatataaaagcggc
gtaaaacgcatatcggcggtattcggcgcgtttgccgtggaaatgatcattttgttggcg
gcggttatgctcgggcagtttctgacggagtatctgaacgcggacagccggaccattgcc
cggcagttaagtctgttcctcaatgcctttgcggtgatggagctgttcaagaccttgctg
cgaatgattttttgtccgcgctatcccgaattgcggcgcttgccgatgtccgataaaagc
gcccgttattggaatcatcggctgagtctggtgagcggctttatcggctacagcgccatg
gtcatcgtgccgatcattgccaatcaaatcaatacccaaacggcggcgctggtgaatttt
atcattatgctcgccaccaccgcctatgtactctggctgatcgtgcgcaataaacgcaat
attcaaaaggaactggagcagtttgccaaccgctcgctggctttcttcagcgtgtttatc
cgtgccttcagcctgatttggcattggctggcggtggcgtattttgtcatgctgttttta
ctgacccagttcgaccctggcaatagtctgaaattcatggttaccgccacggtgaaaagc
ctgatgatcatcagcgtgggggcgctgatctccggattattgacccgctggatttcgcgg
catatcaccctctcgccggatgcccggcgcaactatccgcagctgcagcagcgtcttaac
gtttatgtctccagcgcgctgaaaatttgccgggtgctggtggtatttgccgtgatgctg
ctattgctggacgcctggcatttgttcaacctgcgcaactggcttaccggcaactttggc
gcccgcatcgtggacgcgctgctgcggatttttataattctgattttttcagccctcggc
tggaccttgctggccagcattatcgaaaaccggctggccaccgatgcccacggccggccc
cagcccagcgcccggacccgcacgttgttgacgctgtttcgcaatgccctgtcggttatc
atcagcaccattaccatcatgatcatcctttccgaaatcggcgtgaatatcgctccgctg
ctggcgggcgccggcgccctgggcctggccatcagcttcggcgcccagacgctggtgaag
gatgttatcaccggtgtgtttatccaatttgaaaacggcatgaataccggcgatctggtg
accatcggcgatattaccggggtggtggaaagaatgaccatccgttcggtgggcgtacgc
caggataccggcgcctatttcatcattcctttttcatccattaccactttcgccaatttt
gtgcgcggcatcggctcattcgtggccaattatgatgtcaatcgcgatgaagatatcgat
cgcgtcaaccaggcgctgcgggacgcggtgactgaattgatgagcaaagaggatattcgt
cccatggttatcggcgagcccaatttcggcggtgtggtgggtttaaccaatcagtccttt
accgtccgggtatcttttaccacccaagcattgaaacaatggacggtgagatttactctg
gacggtctggtgaaaaaccattttgaagcagcgggtatacggccgccctatcaggcggtg
caaatcatttccgccgccgcgacgcggaataatgtccatgaagcggccaatgatggcctg
ccgccccccgcccctaacgcttaa
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