Sodalis ligni: GTU79_08240
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Entry
GTU79_08240 CDS
T08321
Name
(GenBank) serine hydrolase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
slig
Sodalis ligni
Pathway
slig00550
Peptidoglycan biosynthesis
slig01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GTU79_08240
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
slig01002
]
GTU79_08240
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
slig01011
]
GTU79_08240
Enzymes [BR:
slig01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GTU79_08240
Peptidases and inhibitors [BR:
slig01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
GTU79_08240
Peptidoglycan biosynthesis and degradation proteins [BR:
slig01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
GTU79_08240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Ig_NUP210_16th
DUF7254
Motif
Other DBs
NCBI-ProteinID:
QWA12684
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All DBs
Position
1751835..1753043
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AA seq
402 aa
AA seq
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MKNFALPHKCHGLTLGALLVFTVPAAQAETAPGVPQINAKAYILMDYQSGTVLAESNADQ
RLDPASLTKIMASYVIGQAIKAGKITQQDKVTIGKDAWATGNPELRGSSLMFLKPGEQVS
VADLNNGVVIQSGNDASIALADYVAGSQDAFVSLMNKYVDALGLKNTHFMTVHGLDAGGQ
YSTARDMALLSQALIQDAPDEYALHKQKEFTYNKIKQLNRNRLLWDGNLNVDGIKTGYTD
GAGHSLVASATDSGMRLISVVLGAPTDSVRFRESEKLLTWGFRFYETATPITAAHAFTRQ
RVWFGDRSEVDLGVAKDASVTLPKGQMKGLKASFTLNSPYLEAPLSRHQVVGTIDFQLDG
KVIAQRPLVVMDEVQRGGFFRNIWDWFLQNCTAGLGLPCTDQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatttcgctctcccacataaatgtcatgggcttaccctcggcgccctgttggtg
ttcaccgttccggccgcccaggcggagacggcgcccggtgtgccgcaaatcaatgccaag
gcctatatcctgatggattaccaaagcggcaccgttttggcggaatccaatgccgatcag
cgccttgatcccgccagcctgaccaagatcatggcgagttatgtcatcggccaggccatc
aaggccgggaagattacccagcaagataaagtcaccatcggcaaagatgcctgggccacc
ggcaatccggaattgcgcggttcctctttaatgtttctaaagcccggcgaacaggtttcg
gtagccgatttgaacaacggggtggttattcaatccggtaatgacgccagcatcgccttg
gcggactatgtcgccggcagccaggatgcgtttgtcagcctgatgaataaatatgtcgat
gcccttggcctgaaaaatacccactttatgaccgtccatggtctggatgccggaggacaa
tacagcaccgcgcgggatatggccttgctgagccaggcgttgattcaggacgcaccggat
gagtatgcgctgcataagcagaaagaattcacctacaataaaatcaagcaattgaaccgt
aatcgtcttctttgggacggtaatctgaatgtggacggtatcaaaaccggctataccgac
ggcgcgggtcacagtctggtggcctcggccaccgacagcggaatgcggctgatttcagta
gtgctgggcgcacccaccgacagcgtgcgctttcgcgagagcgagaagctgctgacctgg
ggattccgcttttatgagacggcgacgccgattactgcggctcatgcctttacccgccag
cgggtatggttcggcgatcgcagcgaagtggatctcggtgtcgccaaggatgcttccgta
acgctgcccaagggtcagatgaaaggtttgaaagcatccttcacgttaaactcaccctat
ctggaagcgccgctgtcgcgccatcaggtggtgggcaccatcgatttccagttagacggc
aaagtgattgcgcaacgaccattggtggtgatggatgaggtgcagcgcggcggatttttc
cgtaacatctgggattggttcctgcaaaactgcacagctggtttgggtttgccatgcact
gatcaataa
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