Sodalis ligni: GTU79_08415
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Entry
GTU79_08415 CDS
T08321
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
slig
Sodalis ligni
Pathway
slig00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GTU79_08415 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
slig01007
]
GTU79_08415 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slig03016
]
GTU79_08415 (serS)
Enzymes [BR:
slig01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
GTU79_08415 (serS)
Amino acid related enzymes [BR:
slig01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
GTU79_08415 (serS)
Transfer RNA biogenesis [BR:
slig03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
GTU79_08415 (serS)
Prokaryotic type
GTU79_08415 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
USP8_interact
Uds1
WASH-7_C
Motif
Other DBs
NCBI-ProteinID:
QWA12709
LinkDB
All DBs
Position
1793372..1794664
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AA seq
430 aa
AA seq
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MLDPNLLRNELDAVAEKLARRSFKLDVDTLRKYEERRKVLQVETETLQAERNSRSKSIGA
AKARGEDIEPLRQEVNLLGERLDAAKAELDILQNSIRDMALSIPNIPDDVVPFGKDENDN
QEISRWGEPKQYDFPVRDHVALGEMSDGLDFAAAVKLTGTRFVVMKGQIAHLHRALSQFM
LDLHTEQHGYLETYVPYLVNHASLYGTSQLPKFAEDLFHTQPLSEEAETSAYALIPTAEV
PLTNLVRDEILDEDVLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQVVKPEN
SMQALEELTAHAEKVLQLLNLPYRKILLCTGDMGFASCKTYDLEVWLPAQNTYREISSCS
NIGDFQARRMQARYRSKEDKKPRLVHTLNGSGLAVGRTLVAVMENYQMADGRIEIPAVLV
PYMKGLTHIG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcctaatctactgcgtaatgagctggacgcggttgccgagaaactggctcgc
agaagtttcaagctggatgtcgatactctgcgtaaatatgaagaacgccgtaaggtgttg
caggtagaaaccgaaacgctgcaggccgaacgcaattcccgatccaaatcgatcggcgcg
gcgaaagcccgtggagaagatatcgagcctttgcgtcaggaggtgaatcttctgggtgag
cgcctggatgccgccaaggccgaactggatatattgcaaaatagtatccgcgacatggcg
ttgtccatacccaacattcccgatgacgtggtgcccttcggcaaagacgaaaatgataac
caggaaatcagccgctggggcgaacccaagcagtatgattttccggtgcgcgatcacgtg
gccttgggtgaaatgtccgacgggcttgattttgccgccgcggtgaaactgaccggcacg
cgttttgtggtcatgaaagggcagattgcccatctgcaccgggcgttgtcgcagttcatg
ctggacctgcacactgagcagcatggctatcttgaaacctacgtgccctatctggtgaac
catgcttcactgtacggtaccagccaactgccgaaattcgccgaagatttgttccatacc
cagcccctcagtgaagaagccgagaccagcgcctatgcgttgattcccacggcggaagtt
cccctgaccaatctggtgcgggacgaaattctcgacgaagacgttctgccgctcaagatg
accgcccacaccccgtgttttcgctccgaggcgggttcctacggtcgcgacacccgcggt
ctcatccgcatgcaccagttcgacaaggttgaaatggtgcaggtggtgaaacccgaaaac
tccatgcaggcgctggaagaactcaccgcccatgcggagaaggtcctgcagttgctgaac
ctgccgtaccgtaaaatattgctttgtaccggcgatatgggcttcgcatcctgcaaaacc
tacgacctggaagtgtggctgccggcgcagaatacctaccgggaaatttcctcctgttcc
aatatcggcgatttccaggcccgccgcatgcaggcccgctatcgcagcaaagaggataaa
aaaccgcgtttggtacacaccctcaacggctccggcctggcggtgggacgtacgctggtg
gcggtcatggaaaactaccagatggcggacggccggatcgaaataccggcggtgctggtg
ccctatatgaaaggattgacccatatcggttga
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