Sodalis ligni: GTU79_08445
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Entry
GTU79_08445 CDS
T08321
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
slig
Sodalis ligni
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slig03009
]
GTU79_08445
Ribosome biogenesis [BR:
slig03009
]
Prokaryotic type
ribosomal protein modification factors
GTU79_08445
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
QWA12714
LinkDB
All DBs
Position
complement(1802899..1804656)
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AA seq
585 aa
AA seq
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MTQTFIPGKDAALEDSIQRFYQQLSALGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNG
KGASKKAALASALGEYFERLSTNYFFADFYLGHSIAQGDFVHYPNEKWFPLTADDTLPHG
ILDDRLRNFYDPDGALRAGALVDLQSGNKERGICALPFTRQSDQAVIYIPMNIIGNLYVS
NGMSAGNTANEARVQALSEVFERHIKNRIIAESISLPLIPQTVLDRYPGVLAAISRLEEE
GFPIFAYDASLGGEYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSLKDL
DVFTPPTFDDEEVAEQTNLETHFIDSSGLISWDLFKEDADYPFVDWNFSGTTGAEFAAMM
EIFRRKEAEVYIADYEHLGVYACRILVPGMSDIYPAEDLLFANNTMAAHLRDELLSLPES
QWPPERYLALIERLDDEGLDDFTRVRELLGLATGRDNGWFTLRVGELKAMLALAGGDLEQ
ALIWTEWTLDFNSSVFSPQRENYYRCLQTLLLLAQESGRDPAQYHTAFERMYGAATLASA
TAALRGKQCFAGLFTIDGDLHALPAHRALLAAYEKLQLAKRRYWR
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgacccagacatttatccccggtaaagacgccgccctcgaagactccatccagcgattt
tatcaacaattgtcggcgctgggttttaatattgaagaggcctcctggctcaacccggtt
ccccatgtctggtcagtgcatatccgcgatcgcgactgccccctgtgtttcaccaacggc
aagggcgccagcaaaaaggccgcgctggcctctgctctgggggagtatttcgagcggctt
tccaccaattatttctttgccgatttttatctcggccacagcatcgcccagggcgatttt
gtgcactatcccaacgaaaagtggtttcccctgacggcggatgatacgttgccgcacggc
atcctggacgatcggctgcggaatttttacgatcccgacggggcgctgcgggccggcgcg
ctggtggatttgcaatccggcaataaagagcgcggcatctgcgccctgccgtttacccgg
caatcggaccaggcggttatctatatcccgatgaatatcatcggcaatctctatgtatcc
aatggcatgtcggcgggcaataccgccaatgaagcgcgggtacaggcgttgtccgaagtg
tttgaacgccatatcaaaaaccgcatcatcgccgaatccatcagtctgccgctcataccc
caaacggtactggaccgctatcccggcgttttggcggccattagccggctggaagaggaa
ggctttcccattttcgcctatgacgcgtcccttggcggtgaatacccggttatctgcgtc
gtgctgttcaatcccgccaacggcacctgttttgcttctttcggcgcgcatccggatttc
ggcgtggcgctggagcgcaccgtgaccgagctgttgcagggccgcagcctgaaagatctg
gatgtctttaccccgcctacctttgacgacgaggaagtggcggagcaaaccaacctggaa
acgcattttattgactccagcgggcttatctcctgggatctgtttaaagaggatgccgat
tatccctttgtggattggaatttcagcggcaccaccggcgcggaattcgccgccatgatg
gagattttccggcgaaaggaggcagaggtctatatcgcggactacgagcatttgggcgtt
tatgcctgccgtatactggtgccgggcatgtccgatatctatccggcggaggatttattg
ttcgccaataacaccatggccgcccatttgcgcgacgagctgctaagcctgccggaaagc
cagtggcccccggagcggtatctggcacttatcgagcggcttgatgatgaagggctggac
gatttcacccgggtgcgtgagctgctgggcctggccaccggccgggacaacggttggttc
accctgcgggtgggagagttgaaagccatgctggcgctcgcgggaggcgacctcgaacag
gcgttgatctggaccgaatggaccctggatttcaatagttcggttttttcgccgcagcgt
gaaaattattaccgctgtttgcaaaccctccttctgctcgcccaggagtccggccgggat
ccggcgcagtaccacaccgcgttcgaacgcatgtacggtgccgccacgctcgccagcgct
accgccgcactgcggggcaagcagtgctttgccggcctgtttaccatcgacggcgatcta
cacgcgctgccggcccatcgcgccctactggccgcctatgaaaaattgcagttggcaaaa
cgccgctactggcggtag
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