Sodalis ligni: GTU79_08550
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Entry
GTU79_08550 CDS
T08321
Symbol
ompF
Name
(GenBank) porin OmpF
KO
K09476
outer membrane pore protein F
Organism
slig
Sodalis ligni
Pathway
slig01501
beta-Lactam resistance
slig02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GTU79_08550 (ompF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GTU79_08550 (ompF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slig02000
]
GTU79_08550 (ompF)
01504 Antimicrobial resistance genes [BR:
slig01504
]
GTU79_08550 (ompF)
Transporters [BR:
slig02000
]
Other transporters
Pores ion channels [TC:
1
]
GTU79_08550 (ompF)
Antimicrobial resistance genes [BR:
slig01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, repression of porin OmpF [MD:
M00746
]
GTU79_08550 (ompF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
Motif
Other DBs
NCBI-ProteinID:
QWA13861
LinkDB
All DBs
Position
complement(1831716..1832807)
Genome browser
AA seq
363 aa
AA seq
DB search
MKRTILAFVIPALLAAGAVNAAEIYNKDGNKLDLYGRLDGLHYFSSDNDGGFAGDGDESY
ARLGFKGETQINDQLTGYGQWEYQIAANDTEGGADHNDGTKTRLGFAGLKFADAGSIDYG
RNYGVVYDALGWTDMLPEFGGDTAYTDNFMVGRTTGVATYRNTNFFGLADGLDFALQYQG
KNDRSTDPHRSNGDGYGGSVSYVSPIGVGIVGAYASSDRTNAQQNLAFGGGDRAEQWATS
LKYDANNVYLAATYGETRNATWMSSNLNTNTGFANKTQDILIVAQYQFDFGLRPSIAYGQ
SKAKDVEGIGDVDLIKYYEVGATYYFNKNMSTYVDYIINDLNDNNKLGYSTGDTVALGVV
YQF
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcactattcttgcatttgtaattccggccttgttggctgcgggtgctgtaaac
gcggccgaaatctataacaaagatggcaacaaactggacctttacggacgtttggacggc
ctgcattacttctccagcgacaacgatggcggtttcgcgggcgacggcgatgagtcttat
gctcgtctcggcttcaaaggcgaaacccaaattaacgaccaattgaccggttacggccaa
tgggaataccaaatcgctgcaaacgacactgaaggcggcgctgaccacaatgacggtacc
aagactcgtttgggctttgccggtttgaaatttgccgacgcgggttcaatcgattacggc
cgtaactacggtgttgtttacgacgcactgggctggaccgatatgttgccggaattcggt
ggggataccgcttacaccgataacttcatggtcggccgtaccaccggtgtggctacctat
cgtaacaccaacttcttcggtctggctgacggcctggattttgccctgcaataccagggt
aaaaacgaccgttcaactgacccgcatcgctctaatggcgacggttacggcggttcagtc
tcttacgtttcccccatcggcgtgggtatcgtaggtgcttatgcttcctcagatcgtacc
aacgcgcagcaaaaccttgctttcggtggcggcgaccgtgccgaacagtgggcgacctct
ctgaaatatgatgctaacaacgtatatctggctgccacttacggcgaaacccgtaatgcc
acctggatgtcaagcaatctgaataccaatacgggttttgccaacaaaacccaggacatc
ctgatcgtggcccagtaccagtttgatttcggtctgcgcccgtccatcgcttacggccag
tccaaagcgaaagatgttgaaggtatcggcgacgttgatctgatcaaatactacgaagtc
ggcgcgacttactacttcaacaaaaacatgtccacttatgttgactacatcattaatgac
cttaatgacaacaacaaactgggctactccaccggcgacaccgttgccctgggcgtagtg
taccagttctaa
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