Sodalis ligni: GTU79_08580
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Entry
GTU79_08580 CDS
T08321
Name
(GenBank) ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
slig
Sodalis ligni
Pathway
slig02010
ABC transporters
slig02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GTU79_08580
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
GTU79_08580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slig02000
]
GTU79_08580
Transporters [BR:
slig02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
GTU79_08580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Bmp
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
QWA12735
LinkDB
All DBs
Position
complement(1841790..1843022)
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AA seq
410 aa
AA seq
DB search
MSLNRYLKRYASLAASALLLCGVMNYALAADTPPPAKKYKIFLSLSYSGNNWMSETANII
KSLAKTPPYDKMVDLEEVISGTDPQAQISAYESMIATKADGIISFPISPTALNRVVRRGC
SQGVKFFMFDSTVTEKCAYNISYITAGAGENMAQFLVNTLGGKGKIFMNRGVPGTSVDKR
HYDGAMHIFSQYPNIKVVSEYYGYWDDRISQRETAKALAAHPDVDGIWSELGEAGVLNAV
ADRKGKMMPITGENMNGFRLGFINDDYRKRGLTGVSAGSPPATAGYAFKLMMEVLTGKRK
LEPTNVEYPLPWATADQIKLCKGSTIADGCNVFAGNLVPEGFSTEIYNPTLLPEVTLDSA
LKGTPTPGMTIQPLPAAIVKAPDEPGINCEHCQPPVDQYRLTKVTATVQP
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaaatagatatctcaagagatatgcgtctcttgccgcctcggcgttgttatta
tgcggcgtaatgaattacgcccttgccgccgatacgccgccgcctgctaaaaaatacaaa
atatttcttagcctgagttatagcggaaataactggatgagcgaaacagccaatattatc
aaatcgcttgcaaaaacaccgccctacgacaaaatggtcgatttggaggaggtaatctcc
ggtaccgacccgcaggcgcaaatatcggcttatgaaagcatgattgccaccaaggccgac
ggcattatcagctttcccatttctcccacggcgttaaatcgggtagtccggcgcggatgc
agccaaggcgtgaagttttttatgtttgattctaccgtaacggaaaaatgcgcttataac
atcagttatattaccgccggcgccggtgagaatatggcccaatttctggttaatacgctt
ggcggtaaaggaaagatatttatgaatcgcggcgtgcccggcacctcggtggataaacgg
cattatgacggcgcaatgcatatattttcccaatatccgaatatcaaagtggtctctgaa
tattacggctattgggacgatcgtatcagccagcgtgaaactgccaaggcgctggcggca
cacccggacgtagacggtatttggtcggaattgggtgaagccggggtattaaacgccgtc
gccgaccgtaaaggaaaaatgatgccgattaccggggaaaatatgaacggattccgtctc
ggatttatcaacgacgactatcgcaaacgcgggctgaccggggtttccgccggttcaccg
ccggcaacggcgggctacgcctttaaattgatgatggaagtgctgaccggcaaacgcaaa
ctggaaccgaccaacgtggaatatccgctgccctgggcgacggcagaccagattaagctg
tgcaaaggcagcaccattgccgacggctgtaacgtttttgccggtaatctggtacccgaa
ggattctccaccgagatttataacccgacattgttaccggaagtgacgctggactcggcg
ctcaaaggcactccaacgccggggatgaccatccagccgctgccggcagcgattgtgaaa
gcccccgacgaaccgggtatcaattgcgaacactgccagccgccggttgaccaatacagg
ctcaccaaagtcacggcgacggttcaaccttaa
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