Sodalis ligni: GTU79_08690
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Entry
GTU79_08690 CDS
T08321
Symbol
ompA
Name
(GenBank) porin OmpA
KO
K03286
OmpA-OmpF porin, OOP family
Organism
slig
Sodalis ligni
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slig02000
]
GTU79_08690 (ompA)
Transporters [BR:
slig02000
]
Other transporters
Pores ion channels [TC:
1
]
GTU79_08690 (ompA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
DUF2490
Motif
Other DBs
NCBI-ProteinID:
QWA12754
LinkDB
All DBs
Position
complement(1866709..1867791)
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AA seq
360 aa
AA seq
DB search
MKKTAIALAVALAGFATVAQAAPQDNTWYTGGKLGWSSYHDTGFYGNGYDNRIGNGPTRN
EQLGAGAFLGYQANPYLGFELGYDWLGRMAYKGSVDNGAFKAQGISLAAKLSYPLTDDLD
IYTRLGGMVWRADSKANYDNGSAGRLSDHDTGVSPLAAIGLEYAITQDWATRLDYQWVNN
IGDASTVGARPDNGLLSVGVSYRFGQGTPAPVVTPAAPAPAPVVQTKHFTLRSDVLFNFN
KSTLKPEGQQALDQLYSQLSSLDPKDGSVVVLGYTDRIGSEQYNLKLSQARAQSVVTYLI
SKGIPSDKISARGMGKSNPVTGNTCDNVKGRAALITCLAPDRRVEIEVKGYKEVVTQPQS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagacagctatcgcacttgcagtggcattggcgggtttcgcaaccgtagcgcaa
gccgctccccaagataacacctggtacaccggtggtaaattgggctggtcctcttaccat
gataccggtttttacggtaatggttatgataaccgtatcggcaatggtcctacccgtaac
gaacagttaggtgccggtgcttttctcggttatcaggcaaatccgtatttagggtttgaa
ctgggctatgactggctaggccgcatggcttacaaaggcagcgtggacaacggtgcgttt
aaggcccaaggtatttcgctggcagctaaactcagctatccgcttaccgacgatttggat
atttacacccgtttgggtggcatggtttggcgtgctgattcgaaagccaactacgacaac
ggttctgccggtcgcctgagcgatcacgataccggtgtttccccgttggccgctattggt
cttgaatacgctatcacccaggactgggcaacccgtcttgattaccagtgggtcaacaat
atcggcgatgccagcactgtcggcgcgcgtcctgataatggcttgctgagcgtgggcgtt
tcttaccgcttcggtcagggtactccggctccggtcgtgactcctgcggccccggctccg
gccccggttgtacaaaccaagcatttcacactgcgttcagacgtactgtttaacttcaac
aagtccactctgaagccggaaggtcaacaggccctggatcaactgtattcccagttgagc
tccttggatccgaaagacggttccgttgtagtcctgggctataccgaccgtatcggttca
gaacagtataacctgaaactttctcaggctcgtgcgcaaagcgtcgtgacttacctgatt
tccaagggtatcccgtccgacaagatttccgctcgcggcatgggtaaatcgaatcctgtc
accggcaacacctgtgataacgtgaagggccgtgctgctttgattacttgcctggcaccg
gatcgtcgcgtagagatcgaagtgaagggctacaaagaagtggttacacagccgcaatct
taa
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