KEGG   Sodalis ligni: GTU79_08715
Entry
GTU79_08715       CDS       T08321                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
slig  Sodalis ligni
Brite
KEGG Orthology (KO) [BR:slig00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slig03400]
    GTU79_08715 (helD)
Enzymes [BR:slig01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GTU79_08715 (helD)
DNA repair and recombination proteins [BR:slig03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    GTU79_08715 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_12 Viral_helicase1
Other DBs
NCBI-ProteinID: QWA12759
LinkDB
Position
1872256..1874310
AA seq 684 aa
MELKSTSLGKHLAQHPYNRVQLLHAGVEVSGDKHHYIIPFNEILAIRCKRGIVWGELEFE
LPGAKVVRLHGTEWQETQRFYHHLQKSWLDWSRDMSDVCADVLRQQVIAIEQAAARDQWF
QASRLAALQDSIREAFASLPLPLARLEEFEHCRDNYRLCLKWLEQGPAMALRCNQQWTNN
MLEQHKDYFDTVESSPLNLSQSRAVVNGENALLVLAGAGSGKTSVLVARAGWLLRRREAD
PEQILMLAFGRQAAAEMDERIRLRLRVEGIRSWTFHALALFIIRQGSKKAPAISALESDG
PARRALLITQWRQQCSEKKPQAKGWRQLIVEELGWDVPEGEYWQDERLAQRLAPRIERWI
GLMRMHGGTQAEMIQQAPDDLHDVFQKRIRLLSPLLKAWKQALKEEGAVDFAGLMHQAVD
ILQKGRFISPWKHILVDEYQDISPQRIKLLEALCRQNRRTSLFAVGDDWQAIYRFSGAEL
SLTTGFTERFDAGAQCALDTTYRFNQRIGEIATAFVLQNPYQLKKDLNSLTKGTKKSVLI
LPDSQLETLLNKLSGFALPAERILILARYHYLRPSLLDKAVTRWPTLNIDFMTMHGSKGQ
QADYVIIIGMNEGKDGFPAAARETVFERVLLPQPEDFPDAEERRLLYVALTRAKQQVWLL
HDSGQPSVFIETLAQLGVPKVHKP
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggaactgaaatcgacttccctcggcaagcatctggcacagcatccctataatcgggtg
caattgttacacgccggcgtcgaggtcagcggcgataagcaccattacattattcccttt
aatgaaattctggccattcgctgcaagcggggaattgtctggggcgagctggagttcgaa
ttgcccggggcgaaggtagttcgtcttcacggcacggagtggcaggaaacgcagcggttt
tatcaccacctgcaaaaaagctggctcgattggagccgtgatatgagcgatgtgtgcgcc
gatgtgctccgccagcaggtgatagccattgaacaggccgcggcccgggatcaatggttc
caggcgagccggctggcggcgctgcaagacagcatccgcgaggcgtttgcgtctttgccg
ttgccgctggcgcgcctggaggagtttgaacactgccgcgacaactaccgcctgtgcctg
aaatggctcgagcagggcccggcgatggcgctgcgctgcaaccagcagtggacgaataac
atgctggaacagcataaagactattttgataccgtcgaaagttctccccttaatctttct
caaagccgcgcggtggttaacggtgaaaacgccctgctggtgctggcgggcgccggcagc
ggcaaaacctcggtgctggtggcccgcgccggctggctgttgagacgcagggaagccgat
ccggagcaaatactgatgctggccttcggacggcaggcggcggcggaaatggatgagcgc
atccggttgcgcctgcgggtggagggcatccgatcctggactttccatgccctggccctg
tttattatccggcaaggcagtaaaaaggcgccggccataagcgctttggagagtgatggc
ccggcgcggcgagcattattgataacgcaatggcgccagcagtgtagtgagaaaaaaccc
caggcaaaaggctggcggcaactgatcgtcgaggaactgggatgggacgtcccggaaggg
gagtattggcaggacgaacggctggcacagcgtctggcgccccgtatcgagcgatggatc
ggcttgatgcgcatgcacggcggcacccaggcggaaatgatccagcaggcacccgatgat
ttacacgatgtctttcaaaaacgtatccgcctgctgtcgccattgctgaaagcctggaaa
caggcccttaaagaggaaggcgcggtggattttgccggactgatgcaccaggcggtggat
atcttgcaaaaaggccggtttatcagcccttggaaacatatcctggtggatgaataccag
gacatatccccccagcgcataaagttattggaagcgctgtgccggcagaatcgccgaacg
tcgctgtttgccgtcggcgacgattggcaggccatttatcgtttcagcggcgccgagctc
tccctgaccaccggctttaccgaacgtttcgacgccggagcgcagtgtgccctggatacc
acctatcgtttcaaccagcgtatcggtgaaatcgccacggcgtttgtgctgcaaaatccc
tatcagctcaaaaaagacctgaatagtttgactaaaggcaccaaaaaatccgttttgatc
ctgcccgactctcaacttgagacgctactgaataagctcagcggcttcgccctgcccgcg
gaacggatcctgatactggcccgctaccattatctgcggccgtccctgctggataaagcg
gtaacccgctggccaaccctgaatatcgattttatgaccatgcacggcagcaaagggcaa
caggcggattacgtcatcattatcggcatgaatgagggcaaggacggcttccccgcggcg
gcgcgtgaaaccgtgttcgaacgggtcttgctgccgcagccggaggatttccccgatgcc
gaggagcggcgtctgctgtatgtcgccctcaccagggcaaagcagcaggtatggttgctg
cacgattccgggcagccgtcggtatttatcgagacattagcgcagttgggcgtgcctaaa
gtacataaaccttga

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