Sodalis ligni: GTU79_10150
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Entry
GTU79_10150 CDS
T08321
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
slig
Sodalis ligni
Pathway
slig00061
Fatty acid biosynthesis
slig00071
Fatty acid degradation
slig01100
Metabolic pathways
slig01212
Fatty acid metabolism
slig02024
Quorum sensing
slig04146
Peroxisome
Module
slig_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GTU79_10150
00071 Fatty acid degradation
GTU79_10150
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GTU79_10150
09145 Cellular community - prokaryotes
02024 Quorum sensing
GTU79_10150
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
slig01004
]
GTU79_10150
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slig04147
]
GTU79_10150
Enzymes [BR:
slig01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GTU79_10150
Lipid biosynthesis proteins [BR:
slig01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GTU79_10150
Exosome [BR:
slig04147
]
Exosomal proteins
Exosomal proteins of breast milk
GTU79_10150
Exosomal proteins of breast cancer cells
GTU79_10150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QWA13878
LinkDB
All DBs
Position
2157846..2159447
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AA seq
533 aa
AA seq
DB search
MPAVLARHLREGADRVFLICPETGRTLTFAQLALAARRQGQWLLAAGHRPGDHIALLLPG
GFDTVALCLSCMLTGYVPVPLSLLAADTALAWIITHCGTKTVITSREYAPRLRGVLDSLP
PAGRPLMAIRERDFPTGGADSPKPEDFPSRTGDNPFIPIPSATDEAAIYTPHPADDPAAC
GQPLSARSPALLIYTSGTTGLPKGVVMTHGNMLAAAERIARWHRLTPQDRLLCALPLYHI
NGQVIGTLVPFVSGGSLVAPRRFSVSRWWGMVERYRCTWLNLVPTMIAFLLHDASDGDAR
YPWVKFARSASAPLPPARHRQFEQRFGIAVIEGMGMTESGSLAFCNPHPGRVYGSVGLPC
GIETAIAGPGGERLADNCGGEIILRGPNIMAGYHLDSAQTAAAIDAGGWLHTGDLGYRDE
RGFYFITGRMKEIIIKGGENIAPREIDEALAYFPGLREAAAFAIPDADYGQNIAAALVLQ
TGMALDEAALRAWCLERLGSFKAPVRFYLVTALPRGGSGKVQRLALCARFAEG
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
ctgccggcggtgctggcccggcatctgcgcgagggcgccgatcgggttttcctgatttgt
ccggagaccgggcgcaccctcaccttcgcacagctggccctggccgcccggcgccaaggc
cagtggttactggccgccggccataggcccggtgatcatatcgctctgctgctgcccggc
ggctttgacaccgtggcgctttgcctgtcatgcatgctgacgggctacgtgccggtgccc
ctgagcttgctggctgccgacacggccctggcgtggattatcacccattgcggcactaaa
accgtcatcaccagccgggagtacgctccccgcctgcggggggtgctggacagcctgccg
ccggcgggacgtcccttgatggcgatccgcgaacgggattttccgacgggcggcgcggat
agtcctaagccggaggattttccgtcccggacgggggataacccgttcatacctataccg
tccgcgacggacgaagcggccatctacacaccgcaccccgccgacgatccggccgcctgc
gggcagccgctgtccgcccgaagtccggcactgctgatttatacctcgggcaccaccggc
ctgcccaaaggggtcgtcatgacccacggcaatatgctggccgcggcggaacgcatcgct
cgctggcatcggcttacgccgcaggatcgcctgctgtgcgcgttgcccctttatcacatc
aacggccaggtcatcgggacgctggttccctttgtcagcggcggcagtctggtggcgccg
cggcgtttttccgtctcccgctggtggggcatggtggaacgttatcgctgcacctggctc
aacctggtgcccaccatgatagcctttcttttgcacgacgcttccgacggcgatgcccgc
tatccctgggtcaaattcgcccgatccgcctccgcgccgctgccgcccgcccggcaccgg
caattcgagcagcgcttcggcatagcggtcatcgaaggcatgggtatgacggagtcgggg
tcgctggcgttctgcaatccccatcccggccgggtctatggcagcgtcggcttgccctgc
ggcatcgagaccgccattgccggtcccggcggagagcggctggcggataattgcggtggc
gaaattatcctgcggggccccaacatcatggccggctatcatctggacagcgcacaaacc
gcggcggccattgacgccggcggctggctgcataccggcgatctgggctatcgcgacgag
cgcggattctattttattaccgggcggatgaaagagatcatcatcaagggcggagaaaat
atcgctccgcgggaaatcgacgaggcgctggcgtatttccctggtctgcgtgaagcggct
gcttttgcgatacccgatgccgattacggccaaaatatcgccgcggcgctggtattgcag
accggcatggctttggatgaggccgcgttgcgggcatggtgcctggagcggctggggagt
ttcaaagcgccggtgcgtttttatctcgttacggcactgccccggggcggttcgggtaaa
gtgcagcgattagcgctctgcgccaggttcgccgagggctga
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