Sodalis ligni: GTU79_11790
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Entry
GTU79_11790 CDS
T08321
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
slig
Sodalis ligni
Pathway
slig02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GTU79_11790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slig02000
]
GTU79_11790
Transporters [BR:
slig02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
GTU79_11790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QWA13901
LinkDB
All DBs
Position
2529673..2531280
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AA seq
535 aa
AA seq
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MRKSLLMLALAGVLYAGAGQADEPKDGGDAVVTYQSDIATLDPAIGYDWQNWSMIKSLFS
RLMDYKPGTTDLQKDLAQDYSISDDGKVYTFTLRKDVTFHNGRTLNADDVKYSLERTVNP
KTQSPGAGFFSAIAGYDEMAAGKADHLSGIEVVNPNTIKITLKEPNATFLQVMALNFASI
VPKEAVDQWGADFGKHPVGTGAFELSEWKLGQELVFKKNPHYYRAGIPHLDSIRFEVGQD
PSVALLRLEKGEVDIAGDGVPPAQFLQFKQDPKYKGMLVTGDQLQTGYVTMKTTLPPFDN
VKVRQAVNMAINKDRIVRIINGRAAPANQPLPPAMPGYDKDYKGYAFDVAKAKQLLDQAG
FAKGFDTELYVMNTDPQPRIAQSIQQDLAKVGIRVAIKSLAQANVIAAGGSADQAPMVWS
GGMAWIADFPDPSDFWGPILGCMGAVDGGWNWSRYCNKTLDAEAAKADSLTQPDQQEQRI
ALWRKIFIEAMADAPWAPIFNEKRYTVHSARMGGADALYVDPVHVPVNYDAIWIK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaagtttacttatgctggccctggcgggagtgctgtatgcgggcgccggccag
gcggatgaaccgaaagacggcggcgatgcggtggtgacctaccaaagcgatatcgccaca
ttggatccggccatcggctatgactggcagaactggtcgatgatcaaaagcctgttcagc
cgcctgatggattacaagcccggcaccacggatctgcaaaaggatctggcgcaggattac
agcatctccgacgacggcaaggtctatacctttaccctgcgcaaggacgtgaccttccat
aacggccgcacgctaaacgccgacgatgtgaagtactccctggagcggacggtgaatccg
aaaacccaaagcccgggcgccggctttttcagcgccatcgccggttatgacgagatggcc
gccggcaaagccgaccatttgagcggtattgaggtagtgaatcccaatacgatcaagatc
accctgaaagagcccaacgccacgttcctgcaggtgatggcgctgaacttcgcctccatc
gtgccaaaggaagccgtggatcagtggggagcggatttcggcaagcatccggtgggcacc
ggcgcctttgagctgagcgagtggaagctgggccaggagctggtgttcaaaaagaatccc
cattactaccgggccggtatcccgcatctggacagcatccgtttcgaagttgggcaggat
ccgtcggtggcgctgctgagactggaaaagggcgaggtggatattgccggcgacggcgtg
ccgccggcccagttcctgcagttcaagcaggacccgaaatacaaaggcatgctggtgacc
ggcgatcagttgcaaaccggttatgtcaccatgaagaccaccctgccgccgtttgacaat
gtgaaggtccggcaggcggtgaatatggccatcaacaaggatcgcatcgtcaggatcatc
aacggccgcgcggcgccggccaaccagccgctgcctcccgccatgccgggatatgacaaa
gactataaaggctatgcctttgacgtcgccaaagcgaaacaattgctggatcaggccggt
tttgccaaagggttcgataccgagctttacgtgatgaataccgatccgcagccgcgtatc
gcccaatccatccagcaggatctggccaaggtgggtatccgcgtggcgattaaatccctg
gcccaggccaacgtgattgccgccggcggttcggcggatcaggcgccgatggtgtggtcc
ggcggtatggcctggattgccgatttcccggacccgtccgacttctggggaccgatcctc
ggctgtatgggggcggtggacggcggctggaactggtcgcgctattgcaataaaaccctg
gatgccgaagccgccaaggccgacagcctaacccagcccgatcagcaggaacagcgcatt
gccctgtggcgcaagatctttatcgaagccatggccgacgcgccctgggcgcctattttc
aatgaaaaacgctatacggtgcattcggcgcgtatgggcggggcggacgcgctgtatgtg
gatccggtacacgtaccggtgaactacgacgccatctggatcaaataa
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