Sodalis ligni: GTU79_12375
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Entry
GTU79_12375 CDS
T08321
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
slig
Sodalis ligni
Pathway
slig02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GTU79_12375
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slig02000
]
GTU79_12375
Transporters [BR:
slig02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GTU79_12375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
YchJ_N
Motif
Other DBs
NCBI-ProteinID:
QWA13335
LinkDB
All DBs
Position
2662606..2663613
Genome browser
AA seq
335 aa
AA seq
DB search
MMSAPKRTFVRHALPALLLTVCAAGLWHPSPAQAAETLRLAHASSSDSLINQAMVRFAAE
VKEKTNDRLEIQIFPDGQLGDEGAIADSAGSGAIAMGLGGVVDAIDPRLNAVSLPFLFKD
ADAVHHFLDSAAGKKFLSMGEDRGYVMLSALDSGFRQFANSKKAIVEPADLAGLKIRTPP
NPVILSTIKQLGGLPQSIPFGEVYTSLQSGVVDGIEPELRDFSDQRWYEVVKHVSMANYI
WSANFWYMNKTAYDGLAAADRQALQQSVADTTAWYRDQLSQVYAKLTEQLKSKQVVFNDV
DRAAFLAKSGPVYDQFSKTWGADFIKQLRADAAAE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcagcacccaagcgtacctttgttcgccatgcgctcccggcgcttttattgaca
gtctgcgccgccggcctgtggcatccgtcgccggcgcaggccgccgaaaccctgcgcctg
gcccatgcctccagcagcgacagcctgatcaaccaggcgatggtgcgctttgccgccgag
gtgaaagagaaaaccaatgaccggctggaaatccagatcttcccggacggccaactgggg
gatgaaggcgccattgccgattcagccggctccggcgccatcgccatggggctgggcggg
gtggtggacgccatcgatccgcgcctgaacgcggtgtcgctgccctttctcttcaaggat
gccgacgcggtgcatcatttcctggacagcgcggcgggcaaaaaattcctctcaatgggt
gaggaccgcggctatgtgatgctctccgccctggactccggctttcgccagttcgccaac
agcaagaaagccattgtcgaacccgccgacctcgccggtttgaaaatccgcacgcccccc
aatccggtgatcctctccaccatcaagcagttgggcgggttgccccaatccattcccttc
ggcgaggtgtacacctctttgcaatccggcgtagtggacggtattgagcccgaactgcgg
gatttcagcgatcagcgctggtacgaagtggttaagcacgtctccatggccaactatatc
tggtcggcgaatttctggtatatgaataaaaccgcctacgacggcctggcggcggccgac
cgccaggcgctgcaacagtccgtggccgataccaccgcctggtaccgtgaccagttgtcc
caggtctacgccaagctcaccgagcagttgaaaagcaaacaggtggtgtttaacgatgtc
gaccgggcggcgttcctggccaagtccggtccggtgtacgaccagttctccaagacctgg
ggcgcggactttatcaaacagctgcgcgccgacgccgcggccgagtaa
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