Sodalis ligni: GTU79_12990
Help
Entry
GTU79_12990 CDS
T08321
Name
(GenBank) ABC transporter substrate-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
slig
Sodalis ligni
Pathway
slig02010
ABC transporters
slig02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GTU79_12990
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
GTU79_12990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slig02000
]
GTU79_12990
Transporters [BR:
slig02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
GTU79_12990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF5036
Motif
Other DBs
NCBI-ProteinID:
QWA13434
LinkDB
All DBs
Position
complement(2793940..2795538)
Genome browser
AA seq
532 aa
AA seq
DB search
MDFRKTSLVVLMAALLPAGAALAADNSVLVYCSEASPESFNPQIASSGPSFVASSQVLYN
RLVAFRESDNLPIPSLATAWEISPDGKTYTFTLRQGVKFNSNKYFTPSRDFNADDVIFSV
LRQKDANHPYHKVSQATYEYFNDVGLGSLIQDVKKIDDYHVRFTLTKPDATFLADWGMDF
ASILSAEYADAMLKAGTPERVDTDPIGTGPYNLQEYKVDSIIRYQANPHYWQGEVPTKRL
IFSITPNVSTRLAKLEKNECQIIPAPSPVNFDEIKNNKALALHSVDGMNVGYLAFNTVKK
PFDNALVRQALNYAVDKKAIVDAVFLGSGSVAKSPIPPNMLGFDKDLADYPYDPAKAKAL
LKQAGFEQGFTTDLWSMPVQRPYNPNSRRIAEMIQSDWAKVGVTAKIVSYEWGEYLAGIR
KGEHATALFGWMSDNGDPDNFANTLLGCDSVKSGSNAAFWCDKQYDSLIQQARIISDPAQ
RAALYKQAQQVFHRQAPWIPLANGKTFYATRSNVSGYSVSLNGSDFSKVRLN
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaggaaaacctctctcgtagtgcttatggccgccctgctgccggccggcgcg
gccctggccgccgacaacagcgttctggtctactgctccgaagcctcgccggaatcgttt
aacccgcaaatcgccagctccggcccctcatttgtcgccagttcccaggtgctctataac
cggctggtggccttccgggaaagcgataatctgccgataccctcccttgccaccgcgtgg
gaaatcagtccggacggcaaaacctatacctttaccctgcgccagggcgtcaaattcaac
agcaataaatatttcactcccagccgtgattttaatgccgacgatgtgattttctccgtt
ttgcggcagaaagacgctaatcacccctaccataaggtgtcccaggccacctatgagtac
ttcaatgacgtcggcctcggttcgcttattcaggacgtgaaaaaaatcgatgactatcac
gtccggtttaccctgacaaaacctgatgccaccttcctggcggattggggcatggatttt
gcctccattctctccgcggaatacgccgacgcgatgttaaaagccggcacgccggaacgg
gtggataccgatcccatcggcaccggcccctataacctgcaggaatataaagtggactcc
attatccgctatcaggccaatccccattattggcagggagaggtgcccaccaagcgactt
atcttttcgattacccccaacgtcagcacgcgcctggccaagcttgaaaaaaatgagtgc
cagattattcccgcgccgagtccggttaattttgacgagatcaaaaataacaaagcgctg
gcccttcacagcgtggacggcatgaatgtgggttacctggcgtttaataccgtcaaaaaa
ccgttcgacaatgccctggtgcgtcaggcgttgaattatgcggtggataaaaaagccatc
gtcgatgcggtattcctcggctccggatcggtggcgaaatcccccattccccccaatatg
ctcggctttgataaagatctggcggactacccttatgatccggccaaggccaaggcattg
ctgaaacaggcgggttttgaacaaggctttaccaccgatttatggtcaatgccggtacag
cgcccctataacccgaactcacgccgcattgcggagatgatccagagcgattgggccaaa
gtcggcgtcacggcgaaaatcgtgagctatgaatggggcgaatacctggccggcattcgc
aaaggcgaacacgccaccgcgctgttcggctggatgtcggataacggcgatccggataat
ttcgccaataccctgctgggctgcgacagcgtcaaaagcggttccaatgccgcgttctgg
tgcgataaacagtatgactcgctcattcagcaggccagaatcatcagcgacccggcccag
cgcgccgccctatataaacaggcccagcaggtgttccatcggcaggccccctggataccc
ctggccaacggcaaaaccttttatgccacccgcagtaacgtcagcggctatagcgtcagc
ctcaacggcagcgatttttccaaggtcaggctgaactga
DBGET
integrated database retrieval system
