Sodalis ligni: GTU79_13775
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Entry
GTU79_13775 CDS
T08321
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
slig
Sodalis ligni
Pathway
slig02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GTU79_13775
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slig02000
]
GTU79_13775
Transporters [BR:
slig02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
GTU79_13775
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
nSTAND_NTPase5
AAA_25
AAA_21
AAA_22
nSTAND3
MIT_C
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QWA13549
LinkDB
All DBs
Position
complement(2973780..2974934)
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AA seq
384 aa
AA seq
DB search
MKSYVSFKNIQKTYDGDKLVVKNLNLDIAEGEFLTLLGPSGSGKTTSLMMLAGFENPTQG
EIFLRDQPLHHLPPHQRDIGMVFQNYALFPHMTVAENLAFPLSIRRLNRSDIKEKVDRVL
DRVKLTDLANRYPAQMSGGQQQRVALARALVFEPKLVLMDEPLGALDKQLREHMQMEIKA
LHQALELTIVYVTHDQSEAMTMSDRVAVFNDGIIQQIDRPSKLYEEPQNTFVAQFIGENN
GLLATQAGSEGDYYRAALDDGTMLRALKVRPSSPGRKIMLCIRPERVRVNVPQHQLPAGS
QQISARIQQYIYLGDHVRMLTEVAGQPGFMVKLSAAEVDPGWVAGNEVMLSWQERHLRAL
DAVLSPVPEQMTKDTDVPDNSQAA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagctatgtaagcttcaaaaatatccaaaaaacctacgacggcgacaagctggtg
gttaaaaacctgaacctggatattgccgaaggtgaatttctcacgctgttgggcccgtca
ggttctggaaaaaccaccagcctgatgatgctggcgggatttgaaaacccgacccagggg
gaaattttcctgcgggaccagccgctgcaccacctgccgccccaccagcgggatatcggc
atggtgttccagaactatgcgttatttccccatatgaccgtggcggagaacctggcattt
ccattgtccatacgtcggctgaaccgcagcgatatcaaggaaaaagtggaccgggtgctg
gatcgcgtcaaactcaccgatcttgccaaccgctatccggcgcagatgtccggggggcag
cagcagcgggtggcccttgcgcgggcgctggtattcgaacccaagctggtgttgatggat
gaacccttgggcgcgctggataagcagctgcgcgaacatatgcagatggaaatcaaggcg
ctgcaccaggcgctggagctgaccattgtctatgtcacgcatgatcaaagcgaagccatg
accatgtcggaccgggtggcggtattcaacgacggcatcatccagcagatcgacaggccc
agcaagctgtatgaagaaccgcagaataccttcgtggcgcagtttatcggcgaaaacaac
ggccttttggccacccaggccggcagcgaaggcgactattatcgcgccgccctggatgac
ggcaccatgctgcgggcgctcaaggtccgccccagttcgccggggcgtaaaatcatgctg
tgcatccgccccgaacgggtgcgggtcaatgtgccgcaacaccagcttcccgccggcagc
cagcaaatcagcgcccggatccagcaatatatctatctgggtgatcatgtgcggatgtta
accgaagtggccggccagcccggtttcatggtgaagctcagcgccgccgaagtcgacccc
ggctgggtcgccggcaatgaggtgatgctgtcctggcaggagcggcatctgcgggccctg
gatgcggtgttaagccccgtgcctgagcagatgacgaaagatacggatgtccctgacaac
agccaggccgcctga
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