Sodalis ligni: GTU79_15630
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Entry
GTU79_15630 CDS
T08321
Symbol
hns
Name
(GenBank) DNA-binding transcriptional regulator H-NS
KO
K03746
DNA-binding protein H-NS
Organism
slig
Sodalis ligni
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slig03036
]
GTU79_15630 (hns)
03400 DNA repair and recombination proteins [BR:
slig03400
]
GTU79_15630 (hns)
Chromosome and associated proteins [BR:
slig03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
GTU79_15630 (hns)
DNA repair and recombination proteins [BR:
slig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GTU79_15630 (hns)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF3037
DUF6626
PaaX_C
DUF6280
TetR_C_24
Pullul_strch_C
Motif
Other DBs
NCBI-ProteinID:
QWA08955
LinkDB
All DBs
Position
3369754..3370161
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AA seq
135 aa
AA seq
DB search
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEDSQAQAEIEERTRKLQQ
YREMLIADGIDPNELLQTMSASKATGKTKRAARPAKYQYTDENGESKTWTGQGRTPAVIK
KSIEDEGKTLDDFLL
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcacttaaaattcttaacaacatccgaactctgcgtgcacaagccagagaa
tgtactcttgaaactctggaagaaatgctggagaaacttgaggtagtcgtcaatgagcgc
cgcgaggaagacagccaggcacaggctgaaatcgaagaacgtacgcgcaaattacagcaa
tatcgtgaaatgctgattgccgacggtatcgatccgaatgaattgctgcaaaccatgagc
gcatcaaaagctactggtaaaaccaagcgcgcagctcgtccggctaaatatcaatatacc
gatgagaacggtgaaagcaaaacctggaccggccaaggccgtacacctgctgtcatcaaa
aagtctattgaagatgaaggcaaaacgctggacgatttcctgctgtaa
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