Sodalis ligni: GTU79_18900
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Entry
GTU79_18900 CDS
T08321
Symbol
ompC
Name
(GenBank) porin OmpC
KO
K09475
outer membrane pore protein C
Organism
slig
Sodalis ligni
Pathway
slig01501
beta-Lactam resistance
slig02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GTU79_18900 (ompC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GTU79_18900 (ompC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slig02000
]
GTU79_18900 (ompC)
Transporters [BR:
slig02000
]
Other transporters
Pores ion channels [TC:
1
]
GTU79_18900 (ompC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Porin_1
Motif
Other DBs
NCBI-ProteinID:
QWA09426
LinkDB
All DBs
Position
complement(4067299..4068402)
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AA seq
367 aa
AA seq
DB search
MKLRLISIMAPAALISGVAAAAEIYNCDGNKLDLFGSVVGVHYFSSNEKANGDLSYMRLG
FRGETQISDELTGYGHWKYQGDLNKSEEEKDQQGSTLLGYAGLKYGKFGSLDYGRNFGVL
YDVLAWTDVLPELGGDTYGVDDMMSNRGNGMLTYRNRHFFGLAEGLHFALQYQGKNPESS
KAGEGREVMAANGDGYGMSLSYDFGAGISAAGAFSSAHRTLGQRNLAYGHGGDRANAYSG
ALKFEKDAIYLAAMYTQSYNLMRFGDTKKTVHGFANKARNIELVAQYTFDLGLKPSLAYV
QARGDDIEGYGSRDLRKYIDISTSYNFNKNMLAYVDYQINLLRENTFSRAAGIHHDNIVA
VGMTYQF
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaaactacgacttatttcaatcatggcgccggcagcgcttatttcaggggtggccgct
gccgctgaaatatacaattgtgatggcaataaattagatcttttcggttcggttgtcggc
gtgcattatttttcctctaatgagaaagcgaatggcgatctctcctacatgcgcttgggt
tttcgcggcgaaacccaaataagcgacgagctgaccggctatggccactggaagtaccaa
ggggacctgaataagtccgaagaggaaaaagaccagcaaggctcgaccctgctgggttat
gccggattaaaatacggcaaattcggctcccttgactacggccgtaactttggcgtcctg
tacgacgttcttgcctggacggatgtattgccggagctcggcggcgatacctacggcgtc
gacgatatgatgtccaaccgcggcaacggcatgctcacctatcgcaaccggcattttttc
ggccttgcggaggggcttcacttcgcgctccaataccagggcaagaacccggagagcagt
aaggcaggcgagggccgcgaagttatggcggcaaacggagacggttacggcatgtcgctg
tcctatgatttcggcgcgggcatcagcgccgccggtgcctttagcagtgcccatcgcacc
ctgggacagcggaatctggcctatggccacggtggcgacagggccaatgcctattccggc
gcgttgaaattcgaaaaagatgcgatttatctggcggccatgtatacccagagttataac
ctgatgcgttttggcgacaccaagaaaacggtgcatggatttgccaataaagcgcgaaac
attgaactggtagcgcaatatacgtttgatttaggcttaaagccctctctggcctatgtg
caggcccgtggagacgacatcgaaggttacggcagccgggatctgcggaaatatattgat
atcagcacttcctacaactttaacaaaaacatgctggcctatgtcgattatcaaattaat
ctgttgagagagaatacgttttcccgtgccgccggaatacaccacgataatatcgttgcc
gtgggcatgacctaccagttctga
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