Sodalis ligni: GTU79_18905
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Entry
GTU79_18905 CDS
T08321
Symbol
ompC
Name
(GenBank) porin OmpC
KO
K09475
outer membrane pore protein C
Organism
slig
Sodalis ligni
Pathway
slig01501
beta-Lactam resistance
slig02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GTU79_18905 (ompC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GTU79_18905 (ompC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slig02000
]
GTU79_18905 (ompC)
Transporters [BR:
slig02000
]
Other transporters
Pores ion channels [TC:
1
]
GTU79_18905 (ompC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
Motif
Other DBs
NCBI-ProteinID:
QWA09427
LinkDB
All DBs
Position
complement(4069136..4070272)
Genome browser
AA seq
378 aa
AA seq
DB search
MKLQVLALLIPAMLAAGTAGAAEVYNKDGNQLDLFGSLHGLHYFSNNDSANGDQTYTRIG
FKGQTQINDQLTGYGDWEYQINGHVTEASGTSDGGNFTRYAFAGLKFGDYGSIDYGRNDG
ILYDITAWTDVQPEFDGSTYSADQFMFGRSTGVATYRNNNFFGLVDGLKFAVQYQGENGA
PGETANGRDVLGQNGDGYGMSLSYDLGLGFSVGGAFMSSKRTDEQNGVGQPGISGRGDRA
EAYTGGLKYNANGFYVATEFTQSYNAAPFGSSDSDVYGYANKAQGFEAYAGYTFDFGLVP
FVGYNQTRGKNIGAAGDGNTYDNQDLVKFVDVGATYYFNKNISTYVDYRINLIDSSQFTD
ATGINTDDIVALGLVYQF
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaaactacaggttcttgccctgttgattccagcgatgttagcggctggtacggctggt
gctgcagaagtatataataaagacggtaatcagcttgatttgtttggatcccttcatgga
ttgcactatttttctaacaacgatagtgctaacggcgatcagacctacacccgtatcggt
ttcaaaggtcaaacgcagatcaacgatcaattgaccggttatggcgactgggaataccag
ataaacggccatgtgactgaagcgtccggtacctctgacggcggcaactttacccgttat
gcttttgccggcttgaaattcggcgactacggttcaatcgattacggtcgtaatgacggt
atcctttacgatatcaccgcatggaccgatgtgcagcctgaattcgacggctccacctat
agcgccgaccagtttatgtttggtcgttctaccggcgtcgccacctaccgcaataataac
ttcttcggcctggtcgacggcctgaagttcgctgtgcaatatcaaggtgagaatggcgct
cccggtgaaaccgccaacgggcgtgatgtactgggtcaaaatggcgacggttacggtatg
tcgttgagttacgatctcggcctgggcttctccgtcggcggcgcgttcatgagctccaaa
cgtaccgacgaacaaaatggcgttggtcaaccgggcatctccggtcgtggcgacagagcc
gaagcttataccggcggcttgaaatataacgccaacggtttttatgtagcgacggaattt
acccagtcttataatgctgctccgttcggttccagcgattcggacgtatacggttatgcc
aacaaggcccagggctttgaagcttacgcaggctatactttcgacttcggtctggttccg
ttcgtcgggtataaccagactcgcggcaaaaacatcggcgctgccggcgacggtaatacc
tatgataaccaggatctggtgaaatttgttgacgtgggtgcgacttactacttcaacaaa
aatatatcgacctatgttgactacagaatcaacctgatcgatagcagccagtttaccgat
gcaaccggtatcaataccgacgacatcgttgccctcggtttggtttaccagttctga
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