Sodalis ligni: GTU79_20225
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Entry
GTU79_20225 CDS
T08321
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
slig
Sodalis ligni
Pathway
slig00300
Lysine biosynthesis
slig01100
Metabolic pathways
slig01120
Microbial metabolism in diverse environments
slig01230
Biosynthesis of amino acids
Module
slig_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GTU79_20225 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
slig01002
]
GTU79_20225 (dapE)
Enzymes [BR:
slig01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
GTU79_20225 (dapE)
Peptidases and inhibitors [BR:
slig01002
]
Metallo peptidases
Family M20
GTU79_20225 (dapE)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M18
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QWA09647
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Position
4328270..4329397
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AA seq
375 aa
AA seq
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MACPVLELTQQLIRRPSLSPDDAGCQALLISRLQAAGFTVEPMPFGDTLNFWAWRGEGRT
LAFAGHTDVVPGGNGEHWFTPPFEPALRDGMLYGRGAADMKGSLAAMTVAAERFVAQHPD
HRGRLAFLVTSDEESTAVNGTVKVVEALMARGEHLDYCLVGEPSSHRHVGDIVKNGRRGS
LTANLVVQGIQGHVAYPQLADNPVHRAIPALNELVSTVWDRGNAFFPPTTMQIANIQAGS
GSNNVIPGELKVQFNFRFSTELTDGQIRSQVEALLQRHGLRYSLDWWLSGQPFLTARGEL
VEAVVNAVEHYQEFTPSLETTGGTSDGRFIARLGAQVVELGPVNATIHKVNECVSAADLQ
LLSRMYQRIMEQLVL
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcctgtccggttctggaattaacccaacagcttatcaggcgaccttccctgagtccc
gatgatgcgggctgccaggcgctgctgatatcccgtcttcaggctgccggtttcaccgtt
gagccgatgccgttcggcgataccctgaacttttgggcctggcgcggcgaggggcggacc
ctggcctttgccggccataccgacgtggttccgggcggcaacggggagcactggtttacg
cctcccttcgaacctgccctgcgcgacggtatgctatacggccggggcgccgccgatatg
aaaggttcgctggccgccatgaccgtggccgccgagcgctttgtcgcccagcatccggat
catcggggacggctggcgtttcttgtcacctccgatgaggaaagcaccgccgtcaatggc
acggtaaaggtggtggaagcactgatggcgcgcggagaacatctggattattgcctggtg
ggagaaccttcaagccaccggcatgtcggggatatcgtgaaaaacggccggcggggttcc
ctgaccgccaatctggtggtccagggtatccagggccatgtggcctatccgcaattggcg
gataatccggtgcatcgcgccataccggcgctgaatgaactggtatccaccgtttgggat
cggggcaatgcgtttttcccccccaccacgatgcagattgccaatatccaggccggcagc
ggcagcaataacgtgatccccggtgagctcaaggtgcagtttaatttccgcttcagcacc
gagctgaccgacggacaaatccgatcccaggtggaggccttgctgcagcgccacggcctg
cgctacagccttgactggtggttatccggccagccttttcttaccgcccgcggcgaactg
gtggaggcggtggtcaacgcggtggagcattaccaggaattcaccccttccctggaaacc
accggcggcacgtcggacggcagatttattgcccgcctgggcgcccaggtggtggagctg
gggccggtgaacgccaccatccataaagtgaatgagtgcgtcagcgccgccgacctgcaa
ttgctgagccgaatgtatcagcgcattatggagcaattggtcctatga
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