Sodalis ligni: GTU79_21595
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Entry
GTU79_21595 CDS
T08321
Name
(GenBank) HAMP domain-containing protein
KO
K05875
methyl-accepting chemotaxis protein II, aspartate sensor receptor
Organism
slig
Sodalis ligni
Pathway
slig02020
Two-component system
slig02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GTU79_21595
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
GTU79_21595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
slig02035
]
GTU79_21595
Bacterial motility proteins [BR:
slig02035
]
Flagellar system
Chemotaxis proteins
MCPs
GTU79_21595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
Motif
Other DBs
NCBI-ProteinID:
QWA09871
LinkDB
All DBs
Position
complement(4601183..4603009)
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AA seq
608 aa
AA seq
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MINLKSKINSFKVSHKLYLGFGIILLLVVISSGLSVQRFKSIRDIYEKTNLIYNINIDVF
QVKVNRVKYLYSLDDGVRKVMAGFIDHATLLTQEAQALPWDKTSRDNLDGIALYLGDFNK
SLENMSAYAKKMVEIKSQLHDLYSENAIDAFKTALLTQTLGADLENKLNGFALSFSEIKE
NAYNLQLKGNDDALALLQKNYADDEKKYQDLAASLTPEQKLQFDTLWGYFGRYKNLSETY
YTNYKNLNAAENNVKAAGDKSSAAVKVIINAVQKKNDALAYGSASITIIIGFIAVIFGVL
VSWYITRQITRPVLNNLAVAERIADGDLSGSITSDRNDELGQLTASMARMNAKLRTIISD
VRDCVGTVASSAAKIAMGNTDLSSRTEQQTTAVVETAASMEQLTSTVKNNAENAKHASLI
AGEATQNAHQGGEVMKNVVTTMDAISSSSKKISDITAVINSIAFQTNILALNAAVEAARA
GEQGRGFAVVASEVRSLSQRSSQAAKEIAMLIGESVSRIDAGSALVAQAGDTMKQIVASV
MRVNDIMGEISSASEEQSQGIEQIARAIGELDTTTQQNAALVTESSIAAGTLEDQSAVLE
KLVASFIL
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgattaatttaaaaagtaaaataaacagctttaaagtatcccataagctctacttggga
tttggcattattttattattggtggttatttcctcaggattaagcgtacaacggtttaag
tccatacgcgatatttatgaaaaaaccaatttaatctataatatcaatatcgatgtcttc
caggttaaagtcaatcgcgttaaatatctgtattcacttgatgacggcgtacgtaaggtg
atggccgggtttatcgatcacgccaccttgctgacgcaagaagcacaggcgttgccctgg
gataaaacctcccgcgataatcttgatggtattgccctgtatctcggcgattttaataaa
tcattagagaatatgagcgcttacgccaagaaaatggttgagattaaatcgcaattgcat
gacctgtatagtgagaatgccatcgacgccttcaaaaccgccttgcttacccagacactg
ggtgcggatttggagaataaactcaatggatttgccttatcttttagtgaaatcaaagaa
aacgcctacaatctgcagctgaaaggcaacgatgatgccctggccctgctgcaaaaaaat
tatgcggatgatgagaaaaaataccaggacttggccgccagcctgactccggaacaaaaa
ttgcagttcgatactttgtggggttattttggccgatataagaatctcagcgagacctat
tatacaaactacaagaatttaaacgcggccgaaaacaacgtcaaggccgccggggataag
agcagtgccgcggttaaagtcattatcaatgccgtgcagaaaaaaaatgatgcattggcc
tatgggtcggcaagcattaccattattataggctttatcgcagtgattttcggcgttttg
gtttcctggtatatcacccggcaaattacccggccggtgctgaacaacctggcggttgcc
gagcgtatcgcggatggcgatctcagcgggtcgataacctccgatcgtaatgatgaactg
gggcagcttaccgcgtccatggcgcgcatgaatgccaagctgcgtacgattatttccgat
gtgcgcgactgcgtcggcaccgtggcgtcgtcggcggctaaaatcgccatgggcaacaca
gatctttcctcacgcaccgagcagcaaaccaccgccgtggtggaaaccgccgccagcatg
gagcagctcacctcgacggtgaaaaacaatgcggaaaacgccaaacatgccagcctgatc
gccggcgaagccactcaaaatgcccatcagggcggtgaagtgatgaaaaatgtcgtcacg
accatggacgccatttcatccagttcaaagaaaatctccgatattaccgccgtcatcaac
agcattgctttccagaccaatattctggcgcttaacgcggcggtggaagcggcgcgcgcc
ggtgaacagggccgcggattcgcggtggtggccagcgaagtgcgcagtttgtcgcagcgc
agctcacaggcggcgaaagaaatcgccatgcttatcggcgagtccgtttcgcgcattgac
gcgggttccgcactggtggcgcaggccggcgataccatgaaacaaatagtcgcctcggtc
atgcgggtgaatgatattatgggggaaatttcttccgcctcggaagagcagagccaggga
atagaacaaatcgcccgcgccatcggtgaactggacaccacaacccagcagaatgccgcc
ctggtgaccgaatcctcaattgccgccggcacgctcgaggatcaatcggcggtactggaa
aaactggtggccagctttattttatag
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