Sodalis ligni: GTU79_21730
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Entry
GTU79_21730 CDS
T08321
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
slig
Sodalis ligni
Pathway
slig02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GTU79_21730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slig02000
]
GTU79_21730
Transporters [BR:
slig02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
GTU79_21730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
SMC_N
nSTAND1
Rad17
RsgA_GTPase
AAA_23
AAA_29
AAA_22
AAA_16
AAA_25
nSTAND_NTPase5
AAA_28
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QWA09895
LinkDB
All DBs
Position
complement(4641203..4642273)
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AA seq
356 aa
AA seq
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MAITSRDFRELRLEHISRAFGSHNALRDVTLTVKRGEFIALLGPSGCGKSTALNCLAGLL
SLSGGGIWLDDRRIDMLKPEDRGFGMVFQNYALFPHMTVRRNVGFGLQMQGVAKAKMDLK
VEESLNVVRLAQQADKLPAQLSGGQQQRVAIARAIAVEPPLVLMDEPLSNLDAKLRLEMR
GEIRRIHRLLGSATIYVTHDQDEALSLADRIVVLRDGGVRQIGTPHDLYNRPAHLDVAEF
MGFRNALPARILRKLGDDVEMSLSGATLWGRGMDATNAGEVVAAIRPSDLVPMPEGAIGA
TVTGMEYSGENFLGSGRTADGYEVFFRARDAMAPGATVRLGAPADRVLVYPRENVQ
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcaataacatcacgggattttcgcgaactgcgcctggagcatatcagccgcgccttc
ggcagccataatgcgctgcgggacgtgacgctgacggtaaaacgcggggagttcattgcg
ctgctcggtccgtcgggctgcggtaaatccaccgccctgaattgtctggcgggcctgttg
tccctgagcgggggcggcatttggctcgatgatcgccgtatcgacatgctcaagccggag
gaccgcggctttggcatggtgtttcagaactatgcgctgttcccgcacatgactgtccgg
cgcaacgtgggcttcggcctgcaaatgcagggagtggcgaaagccaaaatggatcttaag
gtggaggaatccctgaacgtggtcaggctggcgcagcaggccgataaattgccggcccag
ctctccggcgggcagcagcagcgcgtggccattgcgcgcgccatcgcggtggagccgccg
ctggtgcttatggacgagcccctttcaaacctggatgccaagctgcggctcgaaatgcgc
ggcgaaatccgccgtatacaccgtttgctgggttccgccaccatttacgtgacgcacgat
caggacgaggccctgtccctcgccgaccggatcgtcgtgttgcgcgatggcggcgtgcgc
cagatcggtacgccgcacgatctctacaatcggccggcccatcttgatgtggcggagttc
atgggatttcgcaacgcgctgcccgcgcggatcctgcgcaagctgggggatgacgtagaa
atgtcactttcgggcgcaaccctatggggccgggggatggacgccacgaacgcgggagag
gtggtggccgccattcgtccttccgacctggttccgatgccggagggtgctatcggcgcg
accgtgaccggaatggagtattccggcgagaattttctcggatccggccggaccgctgac
ggatacgaggtctttttccgggcgcgtgacgctatggccccgggtgcgacggtgcgcttg
ggggcgcccgccgatcgtgtgctggtttacccgcgggagaacgtgcaatga
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