Sodalis ligni: GTU79_22800
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Entry
GTU79_22800 CDS
T08321
Name
(GenBank) CdaR family transcriptional regulator
KO
K02647
carbohydrate diacid regulator
Organism
slig
Sodalis ligni
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slig03000
]
GTU79_22800
Transcription factors [BR:
slig03000
]
Prokaryotic type
Helix-turn-helix
Other families
GTU79_22800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
GAF
Motif
Other DBs
NCBI-ProteinID:
QWA10063
LinkDB
All DBs
Position
complement(4876605..4877762)
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AA seq
385 aa
AA seq
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MATYHLDARLAQEIVARTMQIIDSNINVMDARGRIIGSGDEERVGELHEGALLALSQARV
VDIDDGVARHLHGVRPGINLPLKIDGNIVGVIGLTGNPSQLRQYGELVCMTAEMMLEQAR
LLHMLAQDSRLREELVLNLIRAEEVTPALIEWAQRLGIDINQPRVAAVVEVDSGQFGVDS
AMAELQQLQTLLTTPERDNLIAIVSLTEMVVLKPALNGHGRWDAEEHRRRVDTLFSRMTE
SSRLRVRIALGNYFPGAGGIARSWRTARTTMAVGKQRLPDQRCYFYPDLMLPVLLDSLRG
GWQASELVRPLAKLKAMDNNGLLRRTLIAWFRHNVQPTPTSKALFIHRNTLEYRLNRISE
MTGLDLANFDDRLLLYVALQLDDEA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatatcatctcgacgcgagattggcgcaagaaattgtggcaaggacgatgcag
atcatcgatagcaatatcaacgtcatggatgcccggggccgcatcatcggcagcggcgac
gaagagcgcgtcggtgaattgcacgaaggcgcgctgctggccttgtcccaggcacgggtg
gtggacatcgacgatggcgtggcgcgtcatctgcacggtgtccgcccagggattaatctg
ccgctgaaaatcgacggcaatatcgtgggcgttatcggcctgaccggcaatcccagccag
ttgcgccagtacggcgaactggtgtgcatgacggcggaaatgatgctggagcaggcccgg
ctgctgcatatgctggcgcaagacagccggctgcgtgaagagctggtgctgaacctgatc
cgcgccgaagaggtgacgccggcgttaattgaatgggcgcagcggttagggatcgatatc
aaccagccgcgggtggcggcggtggtagaagtggacagcggccagttcggcgtggacagc
gctatggcggagctgcaacagttgcaaaccctgctgaccactccggaacgggataacctt
atcgccatcgtctcccttaccgaaatggtagtgctgaaaccggccctgaacggacatggg
cgctgggatgcggaggaacaccgccgccgggtcgatacgctgttttcccgcatgacggaa
agcagccgtctgcgggtgcgcatcgcgctgggcaactatttccccggcgcaggcggtatt
gcgcgctcctggcgaaccgcgcgcaccaccatggcggtgggcaaacagcggctgccggat
cagcgctgctatttttatccggacctgatgctgccggtactgctggacagcctgcgcggc
ggctggcaggccagtgaactggtgcgcccgctggccaaactcaaggccatggacaataac
ggcctgttgcgccgcaccctgattgcctggtttcgccacaatgtacagccgacccccacc
tcgaaggcgctgttcatccaccgtaataccctggagtaccgcctgaaccgcatttcggaa
atgaccggcctggatctggccaatttcgacgatcgcctgctgctttatgtcgcgctgcag
ctggatgatgaggcctga
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