Sodalis ligni: GTU79_23015
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Entry
GTU79_23015 CDS
T08321
Symbol
acnB
Name
(GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
KO
K01682
aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
slig
Sodalis ligni
Pathway
slig00020
Citrate cycle (TCA cycle)
slig00630
Glyoxylate and dicarboxylate metabolism
slig00640
Propanoate metabolism
slig00720
Other carbon fixation pathways
slig01100
Metabolic pathways
slig01110
Biosynthesis of secondary metabolites
slig01120
Microbial metabolism in diverse environments
slig01200
Carbon metabolism
slig01210
2-Oxocarboxylic acid metabolism
slig01230
Biosynthesis of amino acids
Module
slig_M00009
Citrate cycle (TCA cycle, Krebs cycle)
slig_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GTU79_23015 (acnB)
00630 Glyoxylate and dicarboxylate metabolism
GTU79_23015 (acnB)
00640 Propanoate metabolism
GTU79_23015 (acnB)
09102 Energy metabolism
00720 Other carbon fixation pathways
GTU79_23015 (acnB)
Enzymes [BR:
slig01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
GTU79_23015 (acnB)
4.2.1.99 2-methylisocitrate dehydratase
GTU79_23015 (acnB)
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Gene cluster
GFIT
Motif
Pfam:
Aconitase_2_N
Aconitase_B_N
Aconitase
Ketoacyl-synt_C
Motif
Other DBs
NCBI-ProteinID:
QWA10101
LinkDB
All DBs
Position
complement(4919927..4922524)
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AA seq
865 aa
AA seq
DB search
MLDDYRKHVAERTAQGIVPKPLDAVQMAALIELLKNPPTGEEAFLLDLVSNRVPPGVDEA
AYVKAGFLAAVVKGEAVSPLISPEKAVELLGTMQGGYNIQPLVDALDDKALAPLAANALK
SMLLMFDSFYDVEAKAKAGNPHALEVMRSWADAEWFLSRPPLAEKITVTVFKVTGETNTD
DLSPAPDAWSRPDIPLHAVAMLKNARDGIVPDRPGVAGPLKLIETLKQKGFPLAYVGDVV
GTGSSRKSATNSVLWYMGDDIPHVPNKRSGGVVLGSKIAPIFFNTMEDSGALPIEVDVSE
LNMGDVIDIYPFKGEIRRHDTDLLLAGFSLNTQVLVDEVRAGGRIPLIIGRGLTSRARES
LGLPPSEIFRHAREVVASDKGFTLAQKMVGRACGVDGIRPGQYCEPKMTSVGSQDTTGPM
TRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVQTHHSLPDFIMNRGGVSLRPGDGIIH
SWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKM
QPGITLRDLVHAIPYFAIKQGLLTVEKKGKKNIFSGRILEIEGLPELKVEQAFELADASA
ERSAAGCTIKLDQAPIVEYLSSNIVLLKWMITEGYGDRRTLERRIKSMESWLADPHLLVA
DDDAEYAAVLEIDLANITQPIVCAPNDPDDARLLSDVAGSKIDEVFIGSCMTNIGHFRAA
GKLLDQHKGALPTRLWVAPPTKMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVA
AGATVVSTSTRNFPNRLGDGADVYLVSAELAAVTSLLGRLPTPEEYLQAISKVDKTAADT
YRYLNFDKLTAYTDKADEVIFQTAV
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
gtgctagatgattatcgtaagcacgttgccgagcgtactgcccaggggattgtgccaaaa
cctcttgatgccgtacaaatggcggcgctgattgaattactgaaaaatccgcccaccggc
gaagaagcattcctgcttgatctcgtgagtaaccgtgttcctcccggcgtcgatgaagcg
gcctacgtaaaggccggttttctggcggccgtcgtcaagggtgaagccgtatctcccctg
ataagccctgaaaaagccgttgagctgctgggtaccatgcagggcggctataacatccag
cccctggtggatgcgctggacgataaggcgctggcgcccttagccgccaatgcattgaaa
tccatgctgctgatgttcgacagcttttacgacgttgaagccaaggccaaggccggcaac
ccccacgctttggaagtcatgcgctcttgggccgatgccgaatggttcctgtcccgtccg
ccgctggcggaaaagattaccgtcacggtgttcaaggtcaccggcgaaaccaataccgac
gacctgtcgccggcgcccgatgcctggtcccgtccggatattccgctgcacgcggtagcc
atgctgaagaatgcccgcgatgggatagtgcccgatcggccgggagtggcggggccgctt
aagttgatagaaaccctgaagcaaaaaggctttcccctggcctacgtcggcgacgtggtt
ggcacgggatcttcacgtaaatccgccaccaactcggtgctgtggtacatgggtgacgat
attccccacgtgcccaacaaacgcagcggcggcgtggtgctgggcagcaagattgcgccg
attttcttcaataccatggaagattccggcgcgctgcctattgaagtggacgtctccgag
ctgaacatgggcgatgtcatcgatatttacccgttcaagggcgaaatccgccggcacgat
accgacctgctgctggccggcttctccctcaatacccaggtactggtggatgaagtgcgg
gccggcggccgtatcccgctgattatcggccgggggctgacgtcccgcgcccgtgaatcc
ttaggattgcccccaagcgaaatcttccgccatgcacgggaagtcgtcgccagcgacaaa
ggctttaccctggcgcaaaaaatggtcggccgcgcctgcggcgtggacggcatccgtcca
gggcaatactgcgagcccaagatgacctcggtgggctcacaggataccaccgggccgatg
acccgtgatgagctgaaggatttagcctgcctcggtttttccgccgacctggtgatgcag
tccttctgccacaccgccgcctatccgaagccggtggacgtgcagacccatcactccctg
ccggacttcatcatgaaccgcggtggcgtctcgctgcgtcccggcgacggcatcatccac
tcctggctgaaccgtatgctgctgccggataccgtgggcaccggcggcgactcccatacc
cgcttccccatcggtatttctttcccggccggttccggtctggtggcgtttgccgccgcc
accggggtcatgccgctggatatgccggaatcggtgctggtccgcttcaaaggtaaaatg
cagccgggcatcaccttgcgggatctggtgcacgccatcccttatttcgccattaagcaa
ggtttgctgacggtggagaaaaagggcaaaaagaatattttctccggtcgtatcctggaa
atcgaaggcttgccggaacttaaggtggaacaagcctttgagctggccgacgcgtcggct
gagcgttctgcggcgggctgcaccatcaagctcgatcaggcgcctatcgttgaatacctg
agttccaatatcgtgctgctgaagtggatgataaccgaaggttatggcgaccgccgcacg
ttggaacgccgcatcaaatccatggaaagctggctggcggatcctcatttgctggtggct
gatgatgatgcggaatatgccgcggtactcgaaatcgacctggcgaatattacccagccc
attgtctgcgcgcctaacgatccggacgatgcgcggctgttgtccgatgtcgccggcagt
aaaatcgatgaggtgtttatcggttcctgcatgactaatatcggtcacttccgtgccgcg
ggcaaattgctggatcagcataaaggcgcgctgccgacccggctgtgggtcgcgcccccc
accaaaatggatgcggcgcagctcaccgaagagggctactacagcgtattcggcaaaagc
ggagcccgcatcgaaatcccgggctgctcgctgtgcatgggcaaccaggcgcgggtagcg
gccggtgcgacggtggtctccacctctacccgcaacttccccaaccgcctgggagacggg
gcggatgtctacttggtctcggccgagctggcggcagtgacctcgctgctgggacgcctg
ccgacgccggaagagtacctgcaggccatatccaaggtagataaaacggcggcggatacc
taccgttacctgaactttgacaagctgacggcttacaccgataaagcggatgaggtaatt
ttccaaaccgcggtataa
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