Sodalis ligni: GTU79_23020
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Entry
GTU79_23020 CDS
T08321
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
slig
Sodalis ligni
Pathway
slig00010
Glycolysis / Gluconeogenesis
slig00020
Citrate cycle (TCA cycle)
slig00260
Glycine, serine and threonine metabolism
slig00280
Valine, leucine and isoleucine degradation
slig00310
Lysine degradation
slig00380
Tryptophan metabolism
slig00620
Pyruvate metabolism
slig00630
Glyoxylate and dicarboxylate metabolism
slig00640
Propanoate metabolism
slig00670
One carbon pool by folate
slig00785
Lipoic acid metabolism
slig01100
Metabolic pathways
slig01110
Biosynthesis of secondary metabolites
slig01120
Microbial metabolism in diverse environments
slig01200
Carbon metabolism
slig01210
2-Oxocarboxylic acid metabolism
slig01240
Biosynthesis of cofactors
Module
slig_M00009
Citrate cycle (TCA cycle, Krebs cycle)
slig_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
slig_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
slig_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
GTU79_23020 (lpdA)
00020 Citrate cycle (TCA cycle)
GTU79_23020 (lpdA)
00620 Pyruvate metabolism
GTU79_23020 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
GTU79_23020 (lpdA)
00640 Propanoate metabolism
GTU79_23020 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GTU79_23020 (lpdA)
00280 Valine, leucine and isoleucine degradation
GTU79_23020 (lpdA)
00310 Lysine degradation
GTU79_23020 (lpdA)
00380 Tryptophan metabolism
GTU79_23020 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
GTU79_23020 (lpdA)
00670 One carbon pool by folate
GTU79_23020 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slig04147
]
GTU79_23020 (lpdA)
Enzymes [BR:
slig01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
GTU79_23020 (lpdA)
Exosome [BR:
slig04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
GTU79_23020 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
Pyr_redox_3
GIDA
FAD_binding_2
Thi4
NAD_binding_8
FAD_binding_3
HI0933_like
AlaDh_PNT_C
DAO
Motif
Other DBs
NCBI-ProteinID:
QWA14048
LinkDB
All DBs
Position
complement(4922891..4924318)
Genome browser
AA seq
475 aa
AA seq
DB search
MSTEIKTQVVVLGAGPGGYSAAFRCADLGLETVLVERYATLGGVCLNVGCIPSKALLHVA
KVIEEAKALSENGITFGEPKTDIDKVRTWKERVVNQLTGGLTGMAKARKVKVVQGVGKFT
GANTLQVDGENGATIINFDNAIIAAGSRPITLPFIPHDDPRVWDSTDALALRTVPERLLV
MGGGIIGLEMATVYYALGSKIDVVEMFDQVIPVADKDVVKVYTKRISKQFNLMLETKVTT
VEAREDGIYVSMEGKKAPADPQRYDAVLVAIGRVPNGKMLDAGKAGVEVDDRGFIRVDKQ
LRTNVPHIYAIGDIVGQPMLAHKGTHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAWV
GVTEKEAKEKGISYEVATFPWAASGRAIASDCQDGMTKLIFDKETHRVIGGAVVGVNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVYEGSITDLPNAKAKKKK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgaaatcaaaacccaggtagtggtacttggggccggtccgggaggatattcc
gccgccttccgctgcgccgatttagggttggaaaccgtgctggtggaacgttacgccacc
ctgggcggcgtttgtctgaacgttggctgtatcccttccaaagcgttattgcacgtggcc
aaggtcattgaagaagcaaaagcattaagcgaaaacggcattaccttcggtgaaccgaaa
accgacattgataaagtgcgtacctggaaagaacgagtggtcaatcagctgaccggcggc
ctgaccggcatggccaaagcccgaaaggtcaaggttgtgcagggggtgggtaaattcacc
ggcgccaataccctgcaggtggacggcgagaatggcgccaccattatcaattttgacaat
gcgattatcgccgcgggctcgcgccccatcacattgccttttataccccatgacgatccc
cgcgtctgggattcaacggatgcgttggcactgcgtacggtaccggagcgtttgctggtc
atgggcggcggcatcatcggcctggaaatggccaccgtgtactatgccctgggttccaaa
atcgacgtggtggaaatgttcgaccaggtcattccggtagccgataaagacgtcgtgaag
gtttacaccaaacggatcagcaagcagttcaacctgatgctggagaccaaggtcaccacc
gttgaagcgcgtgaagacggtatctacgtcagcatggaaggaaaaaaggcccctgccgat
ccgcagcgttacgatgcggtgctggtggccatcggccgcgtacccaacggcaagatgctg
gatgcgggcaaagccggcgtggaagtggacgatcgcggatttatccgggtcgataagcag
ctgcgtaccaatgtaccgcacatctatgccatcggcgatatcgtcggacagccgatgctg
gcgcacaaaggcacccatgaaggccacgtggcggcggaagtgatcgccggtaaaaaacac
tacttcgatcccaaggtgatcccctccatagcctacaccgaaccggaagttgcctgggtc
ggcgtgactgaaaaagaagccaaggaaaaaggcatcagctatgaagtcgccaccttccca
tgggcggcgtccggccgcgccatcgcgtccgattgccaggacggcatgaccaagcttatc
ttcgacaaagagacccatcgggttatcggcggcgcggtggtgggcgttaacggcggcgaa
ctgctgggtgaaatcggtctggccattgagatgggctgcgatgcggaagacattgccctg
accattcatgcccacccgaccctgcatgagtcggtgggtttggcggcggaagtctacgaa
ggcagcatcaccgatctgccgaatgccaaagccaagaaaaagaaatag
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