Sodalis ligni: GTU79_23685
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Entry
GTU79_23685 CDS
T08321
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
slig
Sodalis ligni
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slig03016
]
GTU79_23685 (truB)
Enzymes [BR:
slig01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GTU79_23685 (truB)
Transfer RNA biogenesis [BR:
slig03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GTU79_23685 (truB)
Prokaryotic type
GTU79_23685 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QWA10217
LinkDB
All DBs
Position
complement(5074593..5075540)
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AA seq
315 aa
AA seq
DB search
MGRPSRRGRDINGIVLVDKPMGLSSNDLLQKVKRLFAANKAGHTGALDPLATGMLPICLG
EATKFSQHLLDADKRYRVVARLGQRTDTSDAEGTIISERPVDLGQQQLEQALQRFRGESM
QIPSMYSALKHQGRPLYEYARQGIEVERAARPIRVYELKLVHWDQQSLELEIHCSKGTYI
RTIIDDLGEMLGCGAHVIELRRLAVADYPTERMVTLEQLRALSGEDPAAADTLATLDKLL
LPMDSAVSAMPEVNLTAVLAGYVRLGQAVSVSSGDTPQNAMVRLTEGPERAFFGVGEITE
PGMVAPRRLVAEARG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtcccagtcgtcgcggccgagacataaacggtatcgttctggtggataagccc
atggggctttcctccaatgatctgctgcaaaaagtgaagcgcctgttcgcggccaacaaa
gccgggcataccggcgcgctggatcccctggccaccgggatgctgcccatctgcctgggt
gaagccaccaagttttcccagcatttgctggatgcggacaagcgctatcgggtagtggcc
cggctggggcagcgcaccgatacgtcggatgcggaaggaacgattatcagcgagcgcccg
gtggacctgggccagcagcagctggagcaggccctgcagcgctttcgtggggaatccatg
cagattccctccatgtattcggcgctgaaacaccagggccggccgctgtacgagtatgcg
cgccagggtatcgaagtggagcgcgcagcccggccgatccgggtttatgagctgaagttg
gtgcactgggatcaacagagcctcgaactggaaatccattgctcgaagggcacctatatc
cgcaccattatcgacgatctcggcgaaatgcttggctgcggcgcccatgttatcgagctg
cgccgtctggcggtggctgattatcccaccgagcggatggtgacgctggagcagttgcgc
gccctcagcggcgaagaccccgccgccgccgataccctggccacccttgataagctgctg
ctgcctatggacagcgcggtgtccgccatgccggaagtcaatcttaccgcggtgctggcc
ggttatgtcaggctggggcaagcggtatcggtgtcgtcgggagatacgccgcaaaacgcc
atggtccgattgaccgaagggccggagcgcgcctttttcggcgtgggggaaatcaccgag
ccgggcatggtcgcgccccgccggctggtggcggaagcccgcggctga
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