Sodalis ligni: GTU79_23890
Help
Entry
GTU79_23890 CDS
T08321
Name
(GenBank) translocation/assembly module TamB
KO
K09800
translocation and assembly module TamB
Organism
slig
Sodalis ligni
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slig02000
]
GTU79_23890
Transporters [BR:
slig02000
]
Other transporters
Pores ion channels [TC:
1
]
GTU79_23890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
QWA10250
LinkDB
All DBs
Position
complement(5117773..5121585)
Genome browser
AA seq
1270 aa
AA seq
DB search
MSRGRKIGLSVLAFIILLAGTLVFFIGTAGGLHLLIKGAARWVPGLEIAHVSGGWRDLTV
TGLKYRMPGMTVGAKQFRLSLNPACLRHSELCLDNLSLQDVDIDVKTAALAPPGPAAAEP
QDSGQTVSTPYPLILRHLALSNVRIRIDDTQVTLGSLESGIDFRANNLTVAPTHIDGLLV
ALPKAVEVVAEQAGKQLVQTEQQKQESARAALEKARRQPSPEAAFKAFFAQPLLPDLPDV
HLPLNVRLEGLHGENLRLTGDVDFLISAMDLRGAVQDGHATLERLNVNSPQGLLNASGSA
QLGGGWPLALTLNSSVNSAPLRGEKIRLTLDGGLRENLSAALNFSGPVKAQIKLQTRLAQ
TGLPLSLTVDSPGVQWPLVGQPQYQARNLSLSMTGKAVDYTLSMAASLSGEGLPPAELSL
AGKGTTAQFILSRLHIAALRGQADITGLADWSNAVSWRTELTLSGIDTAGQWPDWPARLD
GKLSVLGSLHGGSWQLRVPELRLDGEVKQNRVTARGSLSGNDAGQWHVSALRLALGRNSL
TVNGDLNNQLALDAVIDAPNLNGTLPGLGGTAAGTLSVRGERLSPQVTANLTAAGLRWQD
LRIRRIALNGRLQSRDIVGGNLNLDVDQLQQGAVSVRRMTLALTGDERAHQLRLNLQGEP
VSGGLTLNGGYDRRQQRWRGTLSQTQFGSPVGEWRLSRPMTLDYQQQAQNVVIGPHCWQN
ANAQLCVPANIQLGASGQAAVLLNRFDLAMLKPFLPAATTLGGVFSGRAQVSWQPGGSLP
KASIVLTGNGIKARQNIQGGVLPVDFDRVTLNAGLENDRATLNWHIGITGNGQFSGQVQI
ADPRNRRALSGVITVNNLSLSLINPLLSGSDHAAGMLNANLRLGGSAMQPQLYGRLSLDR
VIIRSNQLPFAMTESQLAMTFDGTSSALQGVIRTTSGQLNLSGNANWSRINAWNARIAAR
GNRVRITLPPMVRLDVSPDITVEAAPQVLTLNGSVAVPWARIVVQKLPESAVAVSPDEVI
LDAQLQPVAEREVGMSINSNMKIHVGNDVRLDAFGLKARLQGDLNVIQDKQGLGLHGQIS
IPYGRFNAYSQDLIIRRGLLIFSGPPAQPMLNIEAIRNPDSTADGVTAGVRVTGMADQPR
IDVFTDPVKSQQEALSYLLRGQGLNTPGADSSMMTSMLIGMGVAQTGQLVGKIGAAFGVS
NLTLDTQGVGDESQVVVSGNLTPGLQVKYGVGIYDSLATLTLRYRLMPRLYLEAVSGLNQ
ALDLLYQFEF
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgagccggggaaggaaaatcgggctgagcgtgctggcgtttattattctgctggcgggc
actctggttttttttataggcaccgccggcgggttgcatctgctgatcaaaggcgccgcg
cgctgggtgccgggcctggagatagcccatgtcagcggcggctggcgggatttgaccgtc
accggcctgaaatatcggatgcccggcatgacggtgggcgccaaacaattccgtctttcg
cttaatcccgcctgtcttcgccacagtgaattatgcctcgataacctgtccctgcaggat
gtggatattgatgtgaaaacggcggcattggctccgccagggcctgccgccgccgaaccg
caggatagcggccagaccgtcagcacgccttatccgcttattttgcgccatctggccctg
agcaatgtccggattcgcatagatgatacccaggtcaccctcggcagtcttgaaagcggc
attgattttcgcgccaataacctgacggtggcgccgacccatatcgatggtttgctggtc
gcgttgcccaaggccgtcgaggtcgtggcggaacaggccggcaaacagctggtccaaacc
gagcagcaaaagcaagagagcgccagggcagcgctggaaaaggcccggcggcagccgtcg
ccggaagcggcattcaaggcctttttcgcccaaccgctgctgcctgatttgcccgatgtc
catttgccgctgaatgttcggctggaggggctgcatggggaaaacctacgcttgaccggc
gatgtggatttcctcatctcggccatggatttgcgcggcgccgtacaggacggccacgcc
actcttgaacgattgaacgtcaattcgccccagggcctgctcaacgccagcggttccgcg
cagctgggcggcggctggccgctggcgctgaccctcaattcttccgtgaacagcgcgccc
ctgaggggcgaaaaaatccggctgaccctagacggaggcctgcgggaaaatctcagcgcg
gcgctgaatttttccgggccggtaaaagcgcagataaagctgcaaacgcgtctggcccaa
accggcctgccgctgtcgctgaccgtcgacagtcccggcgtgcaatggccgctcgtcgga
cagccgcagtatcaggcgcgtaatctgtcgctgagcatgaccggcaaggcggtggattac
accctgtccatggcggcatcgttaagcggagaaggcctgccgccggcggagctgtcattg
gcgggtaaaggtactaccgcacagtttatcttgtctcgtttgcacattgcggccctgcgg
ggccaggcggatatcaccggtctggcggactggagcaatgccgtcagctggcgcaccgag
ctgacgctctccggcatcgataccgccggacaatggccggactggcccgcccgtctcgac
ggcaaattatcggtgctgggcagtttgcacggcggaagctggcaactgcgtgtaccggag
ctccggctggatggcgaggttaagcagaaccgggtgaccgccagaggatcccttagcggc
aatgacgccggacaatggcatgtttccgcgttgcggctggcgttgggacgcaacagcctg
acggtgaacggtgatttgaacaatcagctggcgctggacgccgttatcgatgcgccgaat
ctgaatgggaccttgcccggcctgggaggaaccgcggccggcaccctgagcgtgcggggc
gaaaggctatcgccgcaggtcaccgccaatctgaccgccgccggcctgcgctggcaggat
ctgcggattcggcgcatcgccttgaacggtcgcctgcaatcccgcgatatcgtgggcggc
aatctcaatctggacgttgatcagctacagcaaggggccgttagcgtgcgccggatgacg
ctggccctgaccggcgacgaacgggcccaccagctacggctgaacctgcagggggagccg
gtatcgggcgggctgacgctgaacggcggttacgatcgccggcagcagcgctggcgcggc
accctgagccagacgcagttcggcagcccggtgggggagtggcggttaagccgcccgatg
acccttgattatcaacagcaggcgcaaaacgtcgttatcggcccccactgctggcaaaat
gccaacgcgcagctttgcgtgcccgccaatatccagttgggggccagcgggcaggccgcc
gtgctccttaaccgttttgatctggcgatgctcaaaccgttcctgccggcggccaccacg
ctgggaggggtattcagcggccgcgcgcaggtgagctggcaaccggggggcagcctgccc
aaggccagcattgtcttgacgggcaacggtatcaaggcgcggcaaaacattcagggcgga
gtgctgccggtggacttcgaccgtgttactctcaatgccggactggaaaacgaccgcgcc
acgctgaactggcacatcggcattaccggcaacgggcaattcagcggacaggtgcagata
gcggatccccgtaaccggcgcgcgctttccggcgttattactgtcaacaatctttccctg
tcgctgataaatccgttattgtcaggctcggatcatgccgcgggtatgcttaacgccaat
ctccgtcttggcggcagcgctatgcaaccgcagctttatggccggctgagcctggaccgg
gttatcatccgcagcaatcagttgccgttcgccatgaccgaaagccagctggccatgacg
tttgacggcaccagctcggccttgcaaggggtcattcgcactaccagcgggcagctcaac
ttaagcggcaatgccaactggagccgtatcaatgcctggaacgcccgcatcgccgcccgg
gggaaccgggtgaggatcaccctgccgccgatggtgcggctggacgtatcgccggatatt
acggtggaggccgcgccacaggtgctgaccctcaacggcagcgtcgccgtgccctgggcg
cggatcgtggtgcagaaactgcctgaaagcgcagtggcggtctccccggatgaagtcatc
ctcgatgctcaattacagccggtggccgagcgggaggtggggatgtccatcaacagtaat
atgaagattcacgtgggcaatgacgtgcgattagacgctttcggccttaaagcgcggctg
cagggcgatcttaatgtgatccaggataaacaggggctgggcctgcacggacaaatctct
attccctacggacgatttaatgcttatagtcaggacctgatcattcgtcgagggctgttg
atcttttccggtccgccggcgcagcccatgctgaatatcgaagccatccgcaaccccgat
tccaccgcggacggcgttaccgccggggttcgtgtcaccggcatggcggatcagccgcgc
atcgacgtgttcaccgacccggtgaaatcgcagcaggaggccctttcttacctgctgcgg
ggccaggggctgaatacgcctggtgccgacagtagtatgatgacatccatgttgatcggt
atgggcgtggcgcagaccgggcaactggtaggcaaaatcggcgcggcgttcggcgtcagt
aatttgaccctggatacccagggcgtgggtgatgaatcccaggttgtggtgagcggtaac
ctcaccccgggattgcaggttaaatacggtgtcggtatttacgattcattggcaacgcta
acgctacgttatcgtttaatgcctagactttatctggaagcggtgtctggacttaaccag
gcattagacttgctctatcagtttgagttttaa
DBGET
integrated database retrieval system
