Sodalis ligni: GTU79_25645
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Entry
GTU79_25645 CDS
T08321
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
slig
Sodalis ligni
Pathway
slig02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GTU79_25645 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slig02000
]
GTU79_25645 (xylF)
Transporters [BR:
slig02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
GTU79_25645 (xylF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
ADH_zinc_N
Beta-barrel_INTS6
Motif
Other DBs
NCBI-ProteinID:
QWA10542
LinkDB
All DBs
Position
complement(5480041..5481036)
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AA seq
331 aa
AA seq
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MKLKTLLLSACAALVLTCQPGIAKQIKIGMAVDDLRLERWQKDRDIFVDKAKSLGADVFV
QSSNGNEETQMSQIENMINRGVDVLVIIPYNGNVLSNVIAEAKQAGIKVLAYDRMINNAD
VDFYISFDNEKVGELQAQSVVNRVPQGNYFLMGGSPVDSNAKMFRAGQMKVLQPLIDSGK
IKVVGDQWADGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALAAQGLAGKVA
ISGQDADLAGIKRIIQGTQTMTVYKPIKQEASNAAIIAIELAKGEKPKSNASLNNGLRAV
PSYLLTPIAVDKSNIDSTVIADGFHKKSELN
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaaaccctcttgctttctgcctgtgcggcactggtgttgacctgccagccg
ggtattgccaaacaaatcaaaatcggcatggcggtggacgatctgcgcctggaacgctgg
cagaaggatcgggatatttttgtcgataaagccaagtccctgggggcggatgtgtttgtt
caatcctccaacggcaatgaagaaacccagatgtcgcaaattgaaaatatgattaatcgc
ggcgtggatgtattggtgataattccttataacgggaatgtgttaagtaatgttatcgcg
gaagcgaaacaggctggaataaaagtcctggcgtatgaccggatgattaataatgctgat
gtggatttttatatctccttcgataatgaaaaagtcggtgagctacaggcgcaaagcgtg
gtcaatcgcgttccccaaggtaattatttcctgatgggcgggtcgccggtggacagtaat
gccaagatgttccgcgccggtcagatgaaagtactgcaaccgttaatcgacagcggcaaa
atcaaggtggtgggcgaccaatgggccgatggctggctgccggaaaacgcgctgaaaatc
atggaaaatgcgctgaccgccaataacaacaaaatcgatgccgtggtggcttccaatgac
gccaccgccgggggggccatacaggctctggcggcgcagggtctggccggtaaagtggct
atttccgggcaggatgccgatctggccggcatcaaacgtattattcagggtacccaaacc
atgacggtctataaacccatcaagcaggaagcctccaatgccgccattatcgccatagag
ctggccaagggtgaaaaacccaaatccaacgcttcgctgaataatggcttgcgggctgtc
ccttcctatctgttgacacctattgcggtggacaagagcaatatcgacagcaccgtgatt
gccgacggtttccataagaagtccgagctgaactga
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