Sodalis ligni: GTU79_25890
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Entry
GTU79_25890 CDS
T08321
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K10021
octopine/nopaline transport system ATP-binding protein [EC:
7.4.2.1
]
Organism
slig
Sodalis ligni
Pathway
slig02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GTU79_25890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slig02000
]
GTU79_25890
Enzymes [BR:
slig01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.1 ABC-type polar-amino-acid transporter
GTU79_25890
Transporters [BR:
slig02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Octopine/nopaline transporter
GTU79_25890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_23
nSTAND1
FtsK_SpoIIIE
AAA_16
AAA_33
G-alpha
PRK
NACHT
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
QWA10587
LinkDB
All DBs
Position
complement(5538609..5539385)
Genome browser
AA seq
258 aa
AA seq
DB search
MNKPAPITLSMIDIRKSFGDQQVLKGISLDARQGEVISILGASGSGKSTFLRCINLLEIP
DEGTVAIGGETIRMKRHPSGRQFPADRRQIDSIRARLGMVFQSFNLWSHMTAMQNVMEGP
LHVLKNSRKECLEQAERLLAKVGLYDRREYYPSQLSGGQQQRVAIARALAMDPEVMLFDE
PTSALDPELVGEVLKVMRALAEEGRTMLVVTHEMGFARGVSNRVVFMHQGYIEAQGTPEA
LFTHHESERFRQFISSHH
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacccgcccccattaccctgtcgatgattgatatccgtaaatctttcggcgat
cagcaggtgctgaaaggcatttcgctggatgcccggcaaggagaagttatttccatactg
ggcgccagcggttcaggtaaaagcacctttctgcgctgcatcaatttgctggagattccc
gacgaaggcacggtagccatcggcggcgaaaccatccggatgaagcgccacccgtcggga
cggcagtttcccgccgaccggcgccagattgacagcatccgcgcccggctgggcatggtg
ttccaaagcttcaatctttggtcgcatatgaccgccatgcaaaatgtgatggaaggcccg
ctgcacgtattgaaaaactcccgcaaagagtgcctggagcaggccgaacgtctgctggcg
aaagtgggactgtacgaccggcgggagtattacccgtcgcagctgtccggggggcagcag
cagcgcgtcgccattgcccgggcgctggcgatggatccggaagtgatgctgtttgacgag
cccacctcggccctggatcccgaactggtgggggaggtgctgaaagtgatgcgcgctctg
gcggaagagggcaggaccatgctggtggtcacccatgaaatgggctttgcccgcggcgta
tcgaaccgggtggtgtttatgcatcaggggtatatcgaggcgcagggcacgcctgaggcg
ctgtttacccaccatgaatccgagcgcttccggcaatttatctccagccatcattag
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