Sodalis ligni: GTU79_26065
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Entry
GTU79_26065 CDS
T08321
Symbol
lsrB
Name
(GenBank) autoinducer 2 ABC transporter substrate-binding protein LsrB
KO
K10555
AI-2 transport system substrate-binding protein
Organism
slig
Sodalis ligni
Pathway
slig02010
ABC transporters
slig02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GTU79_26065 (lsrB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GTU79_26065 (lsrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slig02000
]
GTU79_26065 (lsrB)
Transporters [BR:
slig02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
GTU79_26065 (lsrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
DUF7765
Motif
Other DBs
NCBI-ProteinID:
QWA10617
LinkDB
All DBs
Position
complement(5586598..5587623)
Genome browser
AA seq
341 aa
AA seq
DB search
MAHKIWRKVILAAALGLASASLAGAQAAERIAFIPKLVGVGFFTSGGNGALAAGKELGVD
VTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVKVLTWDSDT
KPECRSIYIDQGTPAQLGTLLVDMAAKQISKPQAKVAFFYSSPTVTDQNQWVKEAKAKIA
AEHPGWTIVTTQFGYNDATKSLQTAEGILKAYGDLDAIIAPDANALPAAAQAAENLGRHD
VVIVGFSTPNVMRPYVERGTVKTFGLWDVVQQGKIAVYVAHEMLQKGDLKVGDKLTIPQV
GQVEVSPNSVQGYQYEGKNNGIVLLPQRVQFDKDNIGKYDF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggctcataaaatctggcgcaaagtgatattggcggcggcgctcggcctggcatcggcc
agtcttgccggggctcaggccgcagaaagaattgcgtttatacccaagctggtaggggtg
ggctttttcaccagcggcggcaacggcgccctggcggcgggtaaggaactgggggtggac
gttacctatgacggccccaccgagcccagcgtctccggccaggtccagcttatcaacaac
ttcgttaaccagggctataacgccatcatcgtgtcggcggtgtcgccggacggcctgtgc
ccggcgctgaagcgcgccatgcagcgcggcgtgaaagtgctgacctgggattccgatacc
aagccggaatgccgttcaatctatatcgatcagggcacgccggcccagttggggacgctg
ctggtggatatggcggccaaacagatttccaagccccaggccaaggtggcgttcttttac
tccagccccaccgtgaccgatcagaatcagtgggtaaaagaggccaaggctaaaatcgcc
gccgaacatcccggctggaccattgtcaccactcagttcggttacaacgacgccaccaag
tccctgcaaaccgccgaaggcattttgaaggcctacggtgatttggacgcgattatcgcc
ccggatgccaacgcgctgcccgccgccgcccaggccgcggaaaacctcggccgtcacgat
gtggttattgtggggttcagcacgccgaacgtgatgcgtccttatgtggagcggggcacg
gtgaaaaccttcggcctgtgggatgtggtgcagcagggcaaaatcgccgtgtatgtcgcc
catgaaatgctgcaaaaaggcgacctgaaggtgggagataagctcaccattccccaggtg
ggccaggttgaggtctcccccaacagcgtgcagggctatcaatacgaagggaaaaacaac
ggcatcgtgctgctgccgcagcgggtgcaattcgataaggacaatatcggtaaatacgac
ttttaa
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