Sodalis ligni: GTU79_26220
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Entry
GTU79_26220 CDS
T08321
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
slig
Sodalis ligni
Pathway
slig02010
ABC transporters
slig02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GTU79_26220
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
GTU79_26220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slig02000
]
GTU79_26220
Transporters [BR:
slig02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
GTU79_26220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
VirJ
Motif
Other DBs
NCBI-ProteinID:
QWA10641
LinkDB
All DBs
Position
complement(5621778..5622737)
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AA seq
319 aa
AA seq
DB search
MKKAFMSLLLALATVTVSAHAADKIKVGFANRTLNGAFFNGLTEYMKIHAKERGYDLITT
DARGDLNKQISDVEDMISQGINYLVLNPQDPEAGMRITQIANRAGIPTVILDSDISLDAP
VITRVQANNAKDNIEIGEYAVQQFGDKPMNCVIISGNQGNLVGEARRTNFVRGVMEAQLR
KYNHTSLTVVSQGWGNWDQQGAQKAMEDIIVAQGNKINCVYSEMDDMALGAILSLKAANK
LQDVKVYAHDGYKKGLEAIERGDLQATAANNPNTLTDTALGVIAKYSAGNKDFPDYVYTP
TIMINKDNVKQVYDPKSLF
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagcattcatgagtcttctgttggctttggcaacggtgacggtatcggctcac
gccgcggataaaatcaaggtgggctttgccaaccggaccctgaacggcgccttttttaac
ggcctgactgaatatatgaagattcacgccaaagagcgcggatatgatttgatcaccacc
gatgcccgcggcgatctgaataaacaaatctctgacgtggaggatatgatttcccagggg
atcaattacctggtgctgaatccgcaggatccggaagccggcatgcgcattacgcaaatc
gccaaccgcgcaggcatccccaccgttatcctggacagcgatatctccctggacgcgccg
gtgattacccgggtgcaggccaataatgccaaagacaatatcgaaattggcgagtatgcg
gtgcagcaattcggcgacaaaccgatgaactgcgtcatcatcagcggcaatcagggcaat
ctggtgggagaagcccgccgcaccaatttcgtccgcggcgttatggaagctcagctgcgc
aaatataaccataccagcctgaccgtcgtcagtcagggctggggcaactgggatcagcag
ggcgcccagaaagccatggaagatatcattgtcgcccaaggcaacaagatcaactgcgtc
tacagcgaaatggacgatatggccctgggcgccatactctccctcaaggccgccaataaa
ctgcaggacgtgaaagtctatgcccatgacggttataaaaagggcctggaagccattgaa
cgcggcgatttgcaggccaccgccgccaataaccccaataccctgaccgataccgccctg
ggggttatcgccaaatattccgccggcaataaagacttcccggactatgtctataccccc
accatcatgattaacaaagataacgtgaaacaagtctacgatcccaagtcgcttttctga
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