Sodalis ligni: GTU79_26250
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Entry
GTU79_26250 CDS
T08321
Name
(GenBank) PLP-dependent transferase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
slig
Sodalis ligni
Pathway
slig00260
Glycine, serine and threonine metabolism
slig00270
Cysteine and methionine metabolism
slig00450
Selenocompound metabolism
slig00670
One carbon pool by folate
slig01100
Metabolic pathways
slig01110
Biosynthesis of secondary metabolites
slig01230
Biosynthesis of amino acids
Module
slig_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GTU79_26250
00270 Cysteine and methionine metabolism
GTU79_26250
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
GTU79_26250
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GTU79_26250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slig04147
]
GTU79_26250
Enzymes [BR:
slig01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
GTU79_26250
Exosome [BR:
slig04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GTU79_26250
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GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QWA10647
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Position
5630191..5631342
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AA seq
383 aa
AA seq
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MTDIATLAVHSGYTPDATGAVMPPIYATSTFAQTAPGEHSGYEYSRSGNPTRHALEQAIA
QLEDGTAGFAFASGLAACATVLELLDHGSHVVAVDDVYGGTYRLLEKVRRRSAGLRISWV
KPGDPGALERAIEPQTRMIWVETPTNPLLKLADLAAVAAIARRHNLISVADNTFASPVLQ
QPLTLGFDIVVHSATKYINGHSDVVAGLAVVGDNPALAEQLAFLQNAVGGVLDPFSSFLT
LRGIRTLALRMARHSESAQRLAEWLARRPEIAAVYYPGLSDHPQYELARRQMRGPGGMIS
IRLKGDDDGAAKRFIGGLNLFTLAESLGGVESLVSQPFTMTHASIPLEQRLANGITPQLV
RLSVGIEDAGDLIEDLGRGLAIL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacatcgcgaccctcgccgttcacagcggctacaccccggacgccaccggcgcg
gtaatgccgccgatttacgctacttccacctttgcccagaccgcgccgggggagcacagc
ggctatgaatactcccgcagcggcaatcccacccgccacgctctggaacaggccattgcc
caactggaggacggcaccgccggatttgccttcgcctcggggctggcggcctgcgccacg
gtattggaactgctggaccacggcagccacgtggtggcggtggacgacgtttacggcggc
acttaccgcctgttggaaaaagtgcgccgccgcagcgccggtttgcggataagctgggtc
aagccgggggatcccggcgcgctggagcgggccattgagccgcagacccggatgatctgg
gtggagacccccaccaatcccctgctgaagctggcggatctggcggccgtcgccgccatc
gcccggcgccataacctgataagcgtcgccgataacacctttgcctcgccggtcctgcag
cagccgttaaccctggggttcgatatcgtggtgcactccgccaccaaatacatcaacggt
cactccgatgtcgtggccgggctggcggtggtgggggacaatccggcgctggcggaacag
ctggcctttttacaaaacgccgtgggcggcgtgctcgatcccttcagcagctttttgacc
ctgcggggcatacgtaccctggcgttgcgtatggcgcgccacagcgaaagcgcgcagcgc
ctcgccgaatggctggcccggcggccggaaatcgcggcggtgtattatcccggcctgtcc
gaccacccgcaatacgaattggcccgccggcaaatgcgcggccccggcggcatgatctcc
atccgactgaaaggcgatgatgacggcgccgccaaacggtttatcggcggcctgaacctg
ttcaccctggcggaaagcctggggggagtggaaagcctggtgagccagcctttcaccatg
acccacgcttcgattccattggagcagcgtctggccaacggcattacgccgcagctggtg
cggctgtcggtgggcatcgaggatgccggcgatctgattgaggatctcggccggggactg
gcgatactgtag
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