Sodalis ligni: GTU79_26510
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Entry
GTU79_26510 CDS
T08321
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
slig
Sodalis ligni
Pathway
slig02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GTU79_26510
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slig02000
]
GTU79_26510
Transporters [BR:
slig02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
GTU79_26510
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
AAA_16
SMC_N
AAA_22
AAA_29
RsgA_GTPase
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QWA10689
LinkDB
All DBs
Position
complement(5691096..5692118)
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AA seq
340 aa
AA seq
DB search
MTSAVALDNVSRRFNGVAAVDRVSLDIADGEFFSLLGPSGSGKSTCLRLIAGFERPDTGT
IRLHGRDTVDLPPYRRDVNTVFQDYALFPHLSLLDNVAYGLMVKGVGRSERMNRARAMLR
LVELEDVHNRKPAHLSGGQRQRVALARALVNEPRVLLLDEPLGALDLKLREQMQGELKTL
QRRLGITFIFVTHDQGEALSMSDRVAVFNRGRIEQVDNPRQLYLTPRSIFVANFVGSANV
IEGELARELTGENGIFAIRPEFARIHRLTRPAADELSVNGELSNILFQGAMTRYELTLAR
GVRFTVSETHPAGVGTPDGPVLGQRLTASWPRAAMTALRE
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcgccgttgccctggataatgtgtcccgtcgtttcaacggtgtggccgccgtg
gatcgggtgtccctcgatattgccgacggggaatttttttccctgctgggaccgtcggga
tcgggcaaaagtacatgcctgcggctgatcgccggttttgagcggccggataccggcacc
attcgcctgcatggacgggataccgtcgatctgccgccctatcggcgcgatgtgaatacc
gtttttcaggattacgcgctgttccctcatctgtcgctgctggataacgtggcctatggc
ctgatggtaaaaggggtgggacgcagcgaacggatgaaccgtgcccgcgccatgctgcgg
ctggtggagctggaggacgttcataaccgcaagccggcccatttgtccggcggccagcgg
cagcgggtggcgctggcgcgggcgctggtcaacgaaccccgggttttgctgctggacgaa
ccgctgggggcgctggatcttaagctgcgggagcaaatgcagggggaactgaaaaccctg
cagcggcggctgggcattacctttatttttgtcacccacgatcagggagaggcgctttcc
atgtccgatcgggtggcggtattcaatcgcgggcgtattgagcaggtggacaatccccgt
cagctctatctcacgccccgcagtatctttgtggccaattttgtcggcagcgccaatgtt
atcgagggtgaactggcgcgggagctgaccggcgagaacggcatcttcgccatccggccg
gagttcgcccgcattcaccggctaacccggccggcggcggatgagctgtcggtcaacgga
gaactgagcaatatcctgtttcagggagccatgacccggtatgaattaaccttggcccgg
ggcgtgcggtttaccgtcagcgaaacccatccggcgggagtggggacgccggacggaccg
gtgctgggccagcggctgacggcgtcatggccccgggcggccatgacggcgctgcgggag
tga
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