Sodalis ligni: GTU79_26775
Help
Entry
GTU79_26775 CDS
T08321
Name
(GenBank) putative porin
Organism
slig
Sodalis ligni
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_5
Shadoo
Motif
Other DBs
NCBI-ProteinID:
QWA10733
LinkDB
All DBs
Position
complement(5747771..5749528)
Genome browser
AA seq
585 aa
AA seq
DB search
MNFQPNRLAAMVAVTLALSVGQAMAAPAPAPSDNATVNLIRLLVKQGVLTQAQSDTLVRQ
AEAEAQQARQAQAQRTAAAPAAAGGAVAGAAAGAAAGPDVQPGDVRVPYVPEIVRDQIRD
EVKGEVMAQAKQENWASPNTFPDWVSRLKFSGDVRARDESHFFSDGNSNQVVDYNGLNRN
GPYDVNSNTSHSLPPILNTRENRENRFRIRARLGVLATLPDDWSAGIRVATGSDDGPVST
SQTLGDDFEKKSIWLDQAWVRWKSPYHTDFTFGRAENPFMHTDLLFSDDLQMDGISAKVP
NLKLTENTSLFGTLGAFPLEYGSDSWPSNSQDKGKSEDKWLFGGQLGSEWKLNDTNTLKG
AVAYYRFDNIAGRRSSSCNLYQGEPACDTDWSQPEFMQKGNTVFLLRNIALDPNDPQDTP
LPQYVGLASEFDLLDLNLQWDTETFNSMKLRLQGNYVRNLAYDEDKMNRRSDGQIVNNLD
DDGHIQSGPNAWMVQTTYGRSLEMQDAGDWNVFAGYKYIQPDAMPDGFNDSTFHLGGTNA
KGYYIGANYAINKLISVEGRWLSADEVYGDPLSINVFQLDLNAHF
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaattttcaacctaatcgattggcggctatggtcgcagtcactctggcattgtcggtg
ggacaggcgatggcagcgccggcgccggcaccctcggataatgccaccgtcaacctgatt
cgcctgttggttaaacagggcgtgttgacgcaggcacagtccgatacgttggtacgccag
gcggaagccgaggcccagcaggcgcggcaggcccaggcgcagcggaccgcggcggcccct
gcggcggccggtggagccgttgccggcgctgcggccggtgccgcagccggtcctgatgtg
cagcccggcgatgtacgggtgccctatgtgcccgaaattgttcgcgatcagatccgcgac
gaggtcaagggtgaagtgatggcccaggccaaacaagaaaattgggcttcccccaacacc
ttcccggactgggtctcgcgtctgaagttcagcggcgatgtgcgggcgcgggacgaatcg
cactttttctccgatggcaacagcaaccaggtggtggattacaatggcctgaacagaaac
ggtccttacgacgtcaacagcaataccagccactcattgccgccgattttgaatacccgc
gagaatcgggaaaaccgcttccgtatccgcgcccgtttaggggtgctggctacattgccc
gatgactggagcgccggcattcgggtggccaccggcagcgatgacggtccggtatccacc
tcacagacgctgggggatgatttcgagaagaaaagcatctggctggatcaggcctgggtg
cgctggaaatctccttatcataccgatttcacctttggccgggcggaaaatcctttcatg
catactgatttgctgttctctgatgatttgcagatggacggcatatcggccaaggtgccg
aacctgaaactgacggagaatacctcgctgttcggtaccttgggcgccttcccgctggaa
tacggttccgattcctggccgtccaacagtcaggacaagggcaagagcgaggacaaatgg
ctgttcggcggccagttgggcagcgaatggaagctgaacgacaccaataccctaaaggga
gcggtggcctactaccggtttgacaacatcgccggacggcgttcctccagctgtaatctc
taccagggggaaccggcctgtgataccgattggtcacagccggagtttatgcaaaagggt
aataccgtattcctgctgcgcaatatcgccctggaccccaacgatccgcaagacacgccg
ctgccgcagtatgtcggcctggcttccgaattcgacctgctggatcttaacctgcaatgg
gataccgaaacctttaacagcatgaaactgcgtttacaaggtaactatgtccgcaacctg
gcctatgacgaagacaagatgaatcgtcgctcggacgggcagattgtcaataatctcgac
gacgacggccatatccaaagcggccctaatgcctggatggtgcaaaccacctacggacgt
tcgctggaaatgcaagacgcaggggattggaacgttttcgccggttacaagtatatccag
ccggatgccatgccggacggtttcaacgattcaaccttccatctgggcggcaccaacgcc
aagggctattacatcggggccaactatgccatcaacaagctgatatcggtagagggccgc
tggcttagcgcggatgaagtctatggcgatcctttgtcaatcaatgtcttccagcttgat
cttaatgcgcatttctaa
DBGET
integrated database retrieval system
