Sodalis ligni: GTU79_27195
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Entry
GTU79_27195 CDS
T08321
Name
(GenBank) HAMP domain-containing protein
KO
K05874
methyl-accepting chemotaxis protein I, serine sensor receptor
Organism
slig
Sodalis ligni
Pathway
slig02020
Two-component system
slig02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GTU79_27195
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
GTU79_27195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
slig02035
]
GTU79_27195
Bacterial motility proteins [BR:
slig02035
]
Flagellar system
Chemotaxis proteins
MCPs
GTU79_27195
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
TarH
Nup54
ATG14
HAMP_2
DUF7389
SKA1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QWA10811
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Position
5859815..5861470
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AA seq
551 aa
AA seq
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MKNISVRLALTGAISVFALMILAISCAGLFALTRSNDTTDFVHQADSRVILINDVYKDSA
RTRAGFALVYASLLKDGKAEPWIYKNIETTHGRMLANIQLFKGLPVMLSSDEAIKTELVE
SANALSQLLDKAEHLLQAGDVKSYYDINIQDIDKAGGRFSTSLEKYQKDTRETVNTLAQM
RNSEYRQLLWTLAIVLFITLLIAITVLFLLRNIILRPLNYAIEQLDAVAEGDLTADIRVS
SKNEIGRLLFAIKGMQQNLMRLVTQVRFGAEEINIGSREIAAGNTDLSSRTEAQASSLEE
TAASMEQLASNVKQNADNARQTSQLAANASQMAESGSKAVSEVVQTMNAISSSSSKISEI
ISVIDSIAFQTNILALNAAVEAARAGEQGKGFAVVASEVRTLAQRTASAAKEIKSLIEDS
ADKVNIGAGQVERAGATMHQLVSSVKHVTDTVAEISAASQEQSTGIDQVNLAVSQMDGVT
QQNASLVEQSSAASASLMEQVRLLLETIHVFKLHEPKGRPEEVKPDITKVSPLPANKPAE
KQNDTAGWETF
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatatttcagttcgacttgcgttgaccggcgcaatttccgtttttgcgctgatg
attttggcgatttcctgcgcaggtctgttcgcgctcacgcgctcaaacgacactactgac
tttgttcaccaggcggatagccgggtaattctgattaatgatgtctacaaagattctgca
cgtacccgtgcgggttttgccctggtctatgccagcttattgaaagatggcaaagccgaa
ccctggatttacaaaaacatcgagaccacccacgggcgcatgctggccaatatccaacta
ttcaaaggcctccccgtcatgctcagtagcgacgaagctataaagactgaactggtcgag
tcggcgaatgccttgagccagcttctcgacaaagcggagcatttgttgcaggcgggggac
gtgaaaagctactacgatatcaacatacaggatatcgacaaagccggaggacgattttcc
acatcgctggagaagtatcagaaagacacgcgtgaaactgtaaacacgctggcgcagatg
agaaacagcgaataccgccagttgctgtggacgttggcaatcgtattattcattaccctg
ttgatagccattaccgtgctgtttttattgcgaaacatcatattgcggccactgaactat
gccatcgaacagctcgatgcggtggcggaaggcgatttaaccgccgacatacgggtatca
agcaaaaacgaaatcggtagattgctcttcgccattaagggaatgcaacaaaacctgatg
cgtctggtcacgcaagtccgctttggcgctgaagagataaacatcggctccagagaaatt
gcggcaggcaacacagacctctcgtcccgcacagaagcacaggcctcttcacttgaagaa
accgccgcctcgatggaacagctcgcctccaacgtcaagcaaaacgccgataatgcgcga
cagaccagccaactcgccgccaatgcttcccaaatggccgagtccggcagcaaggctgta
tcagaagtcgtccagacaatgaatgcgatttcttccagttccagcaaaatttccgagatt
atctcggtaatcgatagcatcgctttccagaccaatatactggcgctaaatgcggcggtg
gaggctgcacgcgccggagagcaaggcaagggcttcgcggtggtggcaagcgaagtacgc
acgctggctcaacgcaccgcctccgcggccaaagagatcaaatccctcatagaagactcc
gcagacaaggtcaacataggcgcagggcaggtggagcgcgccggtgcaaccatgcatcaa
ctcgtttcgtcagtgaagcacgtcactgacaccgtggcggaaatctcggcggcatcacag
gagcaatctaccggtatcgaccaggtcaacctcgcggtttcgcagatggacggggtaacg
cagcagaatgcctcgctggtggaacagtcctcagcggccagcgcctcgctgatggagcag
gtacgcctgctgcttgaaactattcatgtgttcaaattacatgaaccgaaaggcaggcca
gaggaggtcaaaccagacataactaaagtatcgcctcttcccgccaataagcctgctgag
aaacaaaacgacactgccggctgggaaacattctga
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