Sodalis ligni: GTU79_28375
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Entry
GTU79_28375 CDS
T08321
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
slig
Sodalis ligni
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slig03016
]
GTU79_28375 (trmA)
Enzymes [BR:
slig01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
GTU79_28375 (trmA)
Transfer RNA biogenesis [BR:
slig03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
GTU79_28375 (trmA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Cons_hypoth95
Methyltransf_4
Methyltransf_11
Methyltransf_31
TRM5-TYW2_MTfase
MTS
Methyltransf_15
Methyltransf_12
PrmA
DREV
Motif
Other DBs
NCBI-ProteinID:
QWA11003
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Position
6115598..6116707
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AA seq
369 aa
AA seq
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MTTETLPIDAYETQLAEKAARLKAMMAAYRAPEPEIFRSPVNHYRMRAEFRIWHEEQDLY
HIMFDPLTKERIRIDFFAAGSELINRLMTAMIQALRLSPVLRRKLFQLDYLTTMSGEAVI
TLIYHRPLDDEWREAAAALRDGLRAQGFAVNLIGRAAKTKICLDRDYADERLPVSGRELI
YRQIENSFTQPNAAVNIHMLEWALAATQNAQGDLLELYCGNGNFSLALARNFERVLATEI
AKPSVEAAQYNIAANHIGNVQIIRMSAEEFTQAMQGVREFTRLKDIDLASYRCETIFVDP
PRSGLDDATVELVRCYPRILYISCNPESLCRNLESLSQTHDIIRMALFDQFPYTRHMECG
VLLTAKMPE
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgactaccgagacgttgcctatcgacgcttacgaaacgcaattggctgaaaaagccgcc
cgactaaaagcgatgatggcagcttaccgggcgccggagccggaaatattccgttcaccg
gtaaatcattaccggatgcgagccgaattcaggatttggcatgaagagcaggacctctac
cacatcatgtttgatccgctcaccaaagagcgtatccgcatcgatttctttgccgccggc
agcgagttaatcaatcggttgatgacggcaatgatccaggccttgcgcctttcgccggtt
ttacgccgtaagctttttcagctggattatctcaccaccatgagcggtgaagcggtcatc
acgctgatataccaccgtccgttggatgacgaatggcgcgaggccgccgcagcgctgcgg
gatggattgcgggcgcagggttttgcggtaaatctcatcggccgggccgccaaaaccaaa
atttgcctggaccgggattatgcggatgaaagattgccggtatcgggaagggaactcatc
taccggcagattgaaaacagctttacccagccgaatgccgccgtcaatatccatatgctg
gagtgggcgctggcggcaacccaaaacgcccagggagacttgctggagctgtactgcggc
aacgggaatttttcgctggcgctggcgcgtaactttgagcgggtactggcgacggagata
gccaagccttcggtggaagcggcacagtataatattgccgccaaccatatcggcaatgtg
cagatcatccgcatgtcggcggaggagtttacccaggccatgcagggtgtgcgggaattt
acccggctgaaagatatcgacctggccagttaccgctgcgagactatttttgtcgatccg
ccgcgcagcgggttggatgacgccacggtggagctggtccggtgttatccgcgcatcctg
tatatctcgtgcaatcccgagtcattgtgccgcaatttggaatccctttctcaaactcac
gacatcatacgcatggcgctgtttgatcaattcccttacacccgccatatggaatgcggc
gtcttattgacggcaaaaatgcctgaataa
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