KEGG   Sodalis ligni: GTU79_28590
Entry
GTU79_28590       CDS       T08321                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
slig  Sodalis ligni
Brite
KEGG Orthology (KO) [BR:slig00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:slig02044]
    GTU79_28590 (tssC)
Secretion system [BR:slig02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   GTU79_28590 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 ConA_BAM2
Other DBs
NCBI-ProteinID: QWA11043
LinkDB
Position
complement(6166177..6167727)
AA seq 516 aa
MSLQENNVRDHATTEVQNNAAEGAKSVYAALFEKINLTPVTSVTAIESFQNSDALSDVST
DERVTAAVRVFMDLLGQSRQRVERLDKTLLDSHIAALDNQISRQLDQVMHHPDFQRLEST
WRGVKSLIDQTDFRHNVRIELLDISKDHLVQDFDDAPEIAQSGLYAITYTHEYDTPGGEP
IAAAISNYEFDRGPRDIALLRNISKVAAAAHMPFIGSVGPAFFGKETMEDVAAIKDIGNY
FDRAEYLKWKAFRDSDDARYIGLTLPRVLGRLPYGPDTVPVRSFNYIEQVKGPDHDRYLW
TNASFAFAANMVKSFIKNGWCVQIRGPQAGGAVTDLPIHLYDLGTGNQVKIPSEVMIPET
REFEFANLGFIPLSYYKNRDYACFFSANSVQKPALYDSQTATANSRINSRLPYIFLLSRI
AHYLKLIQRENIGTTKDRRLLELELNNWIRGLVTEMTDPGDDLQASHPLRDAKVTVEDID
DNPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPRAKV
NT seq 1551 nt   +upstreamnt  +downstreamnt
atgtcgttacaggaaaacaacgttcgtgatcacgcaaccactgaggtacaaaacaacgct
gccgagggggcgaaaagtgtctatgcggctctgtttgagaagatcaatcttaccccggta
acctccgttaccgctatcgagtcgtttcagaacagcgatgccctttctgatgtctccacc
gatgaaagggtaacggcggcggtccgggtgtttatggacttgctcggacagtcgcgacaa
agggtggagcggctggataaaacgcttttggacagccatatcgccgcgctggataaccaa
atcagccggcaattggaccaggtcatgcatcatccggatttccagcgcctcgaatccacc
tggcgcggagtgaagtccctgattgatcagaccgattttcgccataacgtgcgaattgag
ctgctggatatcagtaaagatcatcttgtgcaggattttgacgatgcgccggaaatcgcc
caaagcggtctctacgccatcacctacacccacgagtatgatacgccgggcggggagccc
attgccgccgccatttcaaactacgagttcgatcgcggtccgcgggatatcgccttgctg
cgtaacatatccaaagtggccgccgccgcccatatgccgtttatcggctccgtcgggccg
gcctttttcggtaaagagaccatggaagacgtggccgccattaaagatatcggcaattat
ttcgaccgcgccgaatacctgaaatggaaggctttccgcgacagcgacgatgcccgctat
atcggtctgaccttgccgcgcgtgctgggccggctgccctacggccctgataccgttcct
gtgcgtagcttcaactacattgagcaggtaaaaggaccggatcacgatcgctacctgtgg
accaatgcatctttcgcctttgccgccaacatggtgaaaagttttatcaaaaacggctgg
tgcgtgcaaatccgcgggccacaggcaggtggggcggtgaccgacctgcctatccacctt
tatgatctcggcacgggcaatcaggtcaagatcccctcggaagtcatgatcccggaaacc
agggaattcgagttcgccaacctgggctttatcccgttgtcttattataaaaatcgagac
tatgcctgttttttctccgccaattcggtgcagaaaccggcgttatacgacagtcagacc
gctacggccaacagccgcatcaattcccgcctgccctatatcttcctgttgtcgcgtatc
gctcattacctgaagcttatccagcgtgaaaatatcggtaccaccaaagatcgccgcctg
ttggagctggagctgaataactggatccgcggcctggtgacggaaatgaccgatccgggg
gacgatttacaggcgtcgcatcctctgcgcgacgcaaaggtgacggttgaagatattgat
gacaacccgggtttctttcgcgtcaaactctatgcggtgccccatttccaggtggaaggg
atggatgtgaatctttcactggtatctcaaatgccgcgggccaaggtttga

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