Sodalis ligni: GTU79_28610
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Entry
GTU79_28610 CDS
T08321
Symbol
cytR
Name
(GenBank) DNA-binding transcriptional regulator CytR
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
slig
Sodalis ligni
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slig03000
]
GTU79_28610 (cytR)
Transcription factors [BR:
slig03000
]
Prokaryotic type
Helix-turn-helix
LacI family
GTU79_28610 (cytR)
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_24
TetR_N
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QWA11046
LinkDB
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Position
6172011..6173051
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AA seq
346 aa
AA seq
DB search
MNVELKRPTVVATMKDVAEKAGVSTATVSRALMNPEKVSAQTRKRVQIAVQSVGYDPQPL
ARQVRRNETRNLLVMVPDICDPFFSEMLRGIEETADEQGYLVLIADCAHQHPDKKSFSDL
IIARQIDGMLLLGSVLPFAIDKTQQQNLPPMVMANEFVPELELATVHIDNLTAAYEAADY
LFKLGHRRIGCISGPADLTLCQYRVQGFIQALRRHGIPAGEHMVYRGDISFQTGAAGLNA
LISQTNPPTAIFCHSDIIAFGALSQARKIGLSVPNDLSLIGFDDITLANYCDPPLTTVAQ
PSFQIGREATLLLLQQVRQHQMTNTSLLLDSKLIVRGSTAAPRIKT
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtggaacttaaaaggcctaccgtcgtggcgaccatgaaggatgtggcggagaag
gcaggggtatctacagccactgtttccagggcattgatgaatcctgaaaaggtttccgcc
cagacccggaaaagagtccagattgcagtacaatctgtcggttacgatccgcaacccctg
gcccgtcaggtaaggcgcaacgaaacccgcaatttattggttatggtgcctgatatttgc
gacccttttttttccgaaatgttgcggggaattgaagaaaccgcagatgagcaagggtat
ctggtcctgatagccgattgcgcgcaccaacatccggataaaaaaagctttagcgatttg
atcatcgcccggcaaatcgatggtatgttgctgctgggttccgttctgccgttcgccatt
gataaaactcagcagcagaatttaccgccgatggtcatggcaaatgaatttgtccccgag
cttgagttggccaccgtacatatcgataatcttaccgcggcctatgaagcggcggattat
ctgtttaaactcggccaccggcggatcggctgtatcagcgggccggcggacctgacattg
tgccaatatcgggtgcagggatttatccaggcgctgcgccgccacggcattccggcgggc
gaacatatggtttaccggggcgatatcagttttcagaccggcgcggcggggcttaatgca
ttaatatcgcaaaccaatccgccaactgctatcttttgtcacagtgatatcattgcgttc
ggcgctttgtcgcaggcaaggaaaatcggcttgagcgtaccgaatgatttgtctctgata
ggatttgatgatattacgctggcaaactattgcgatccgccgttgaccaccgtggcgcag
ccgagtttccagatcgggcgtgaagcgacgctgttgcttttgcagcaggtaaggcagcat
cagatgacgaatacctctttgctgctggacagtaaattgatcgtccggggcagcaccgcg
gcgccccgtataaaaacatga
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