Sodalis ligni: GTU79_28685
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Entry
GTU79_28685 CDS
T08321
Symbol
rbsB
Name
(GenBank) ribose ABC transporter substrate-binding protein RbsB
KO
K10439
ribose transport system substrate-binding protein
Organism
slig
Sodalis ligni
Pathway
slig02010
ABC transporters
slig02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GTU79_28685 (rbsB)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
GTU79_28685 (rbsB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slig02000
]
GTU79_28685 (rbsB)
Transporters [BR:
slig02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
GTU79_28685 (rbsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Peripla_BP_6
ANF_receptor
SBP_bac_11
Gp7_5th
Motif
Other DBs
NCBI-ProteinID:
QWA11060
LinkDB
All DBs
Position
complement(6186950..6187837)
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AA seq
295 aa
AA seq
DB search
MKMKKLAVLMSAVALSAAFSANALAKDTIALVVSTLNNPFFVSMKDGAQQEANKLGYQLV
VLDSQNNPAKELANVQDLTVRGVKLVMINPTDSDAVGNAVILANQAKIPVITLDRKANKG
QIVSHIASDNRVGGKMAGDFIGQKLGNSAKVIELEGIAGTSVARERGEGFKQSADQYKFT
MLASQPADFDRTKGLNVMQNLLTAHPTVQAVFAQNDEMALGAMRALQTVNKTDVLVVGFD
GTADGLKAVQSGRMAATVAQQPDQIGIIGVETADKVLKGGKVDAIIPVALKLVTK
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaaaaaattagctgttttgatgtccgccgttgcgttaagcgccgctttcagc
gccaacgccctggcaaaagatactattgcgctggtggtttccactcttaacaatccgttc
tttgtttcgatgaaagacggggcgcaacaggaagcgaataaactgggttatcaattggta
gtcctcgattcgcaaaacaatccggccaaggaattggctaacgtgcaggatctgacggtg
cgcggcgtcaagctggtcatgataaacccgacggattccgatgcggtgggcaatgccgtt
atcctggccaaccaagccaagatcccggtcatcaccctggatcgtaaggcgaacaagggc
cagatcgtcagtcatatcgcctcggacaaccgggtcggcggcaaaatggcgggtgatttt
atcgggcaaaaactgggtaacagcgccaaggttattgaacttgaagggattgccggcacc
tcagtggcccgtgaacgcggcgaaggattcaagcaatccgccgatcaatacaaattcacc
atgttggctagccagccggctgatttcgatcgcaccaaaggtcttaacgtcatgcagaac
ctgctgaccgcccacccgacggtacaagcggtattcgcgcaaaatgacgaaatggcctta
ggcgcgatgcgtgccctgcaaaccgtcaataaaaccgatgtgttggtggtaggctttgac
ggtacggcggatggactcaaagcggtgcaaagcggaagaatggccgccaccgtggcgcag
cagcccgatcaaatcggtattatcggtgttgaaaccgcagacaaagtattaaaaggcggc
aaggtggatgccataatcccggtagcccttaagctggtcacgaaataa
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