Sodalis ligni: GTU79_28815
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Entry
GTU79_28815 CDS
T08321
Symbol
rfaQ
Name
(GenBank) putative lipopolysaccharide heptosyltransferase III
KO
K02849
lipopolysaccharide heptosyltransferase III [EC:
2.4.99.25
]
Organism
slig
Sodalis ligni
Pathway
slig00540
Lipopolysaccharide biosynthesis
slig01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
GTU79_28815 (rfaQ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
slig01005
]
GTU79_28815 (rfaQ)
Enzymes [BR:
slig01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.25 lipopolysaccharide heptosyltransferase III
GTU79_28815 (rfaQ)
Lipopolysaccharide biosynthesis proteins [BR:
slig01005
]
Core region
GTU79_28815 (rfaQ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
QWA11081
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All DBs
Position
6212777..6213853
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AA seq
358 aa
AA seq
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MPISHDVSPTPVKRILLIKLRHHGDMLLTTPVINTLHRQYPAAEIDILLYKETEAILRYH
PALTHIHVIDRSWKKQGVRHQIQQETGLIKILRSRHYDIVVNLADQWRSAIITYLSGAAV
RIGFDYPKRQSFLWRLAHNRLVSTVNHGRLHTVEQNLTILAPLDIALTDRRTSMHYSPAD
EAHRNTLLASKGITGDYLVIQPTSRWSYKCWDDEKVAELIDALQEQDLPIVLTAAPDKNE
LDMIGHILSLCHNPRVVSLAGELTLTQLASVIDGARLFIGVDSAPMHMAAALNTPCVALF
GPTKLTFWRPWSENSTVIWAGDFTELPPPDDIDTKTQQRYLSAIPVDAVLQAARGYLS
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcctatatctcatgacgtatcaccgactcccgtcaaaaggattctcctgatcaagcta
cgccatcacggcgatatgctgctgaccacaccggttatcaacactctgcatcggcagtat
cccgccgctgagatcgacatattgttatacaaggaaaccgaggccatcctccgttatcat
cctgcgctaacccatatccatgtcattgatcgatcatggaaaaaacagggggtcaggcat
cagattcagcaagagaccgggctgataaaaatcctgcgatcgcggcattatgatatcgtg
gtaaacttggccgaccagtggcgcagcgcgataatcacctacctcagcggcgcggcggtg
cgtatcggcttcgattatcccaagcgacaatcttttttatggcgcctggcccataaccgg
ctggtttccaccgttaatcacggccggcttcacaccgttgaacaaaatctcactattctg
gcgccattggacatcgccttgaccgaccggcgcacctcgatgcattattcccccgccgat
gaggcccatcgcaacaccttgctggcgtcaaagggcattaccggagattacctggtgatt
cagcccacttcccgctggagctataaatgctgggacgatgaaaaggtggcggaactgata
gacgcgctgcaggaacaggatttacccatcgtactgaccgccgcgccggataaaaacgag
ctcgacatgatcgggcatattctgtccctttgccataatccccgggtcgtctccctggcg
ggagaactaaccttaacgcagctggcgtcggttatcgacggcgccaggctatttatcggg
gtcgattcggcgccgatgcacatggcggcggcgttgaatacgccctgcgtcgctctgttc
ggtcccaccaagttgacgttctggcggccctggagtgagaacagcaccgttatctgggcc
ggcgattttactgaactcccgccgccggatgacatcgacaccaaaacccaacagcgttat
ttaagcgccatcccggtggatgccgtcctccaggccgcacggggatatttgtcatga
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