Sulfuricaulis limicola: SCL_0113
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Entry
SCL_0113 CDS
T05241
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
slim
Sulfuricaulis limicola
Pathway
slim03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
slim00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SCL_0113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slim03021
]
SCL_0113
03400 DNA repair and recombination proteins [BR:
slim03400
]
SCL_0113
Enzymes [BR:
slim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SCL_0113
Transcription machinery [BR:
slim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SCL_0113
DNA repair and recombination proteins [BR:
slim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SCL_0113
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Imm35_like
Motif
Other DBs
NCBI-ProteinID:
BAV32437
UniProt:
A0A1B4XC88
LinkDB
All DBs
Position
122180..122485
Genome browser
AA seq
101 aa
AA seq
DB search
MARITVEDCLDNVDNRFQLVLVATRRARQLINGADAHVPRENDKPTVLALREIADGYVTN
AILDEEVAPVVLEANENTADQPQTGGLDISPAAGKEGGTEI
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtatcacggtagaagattgtctggacaacgtcgataaccgcttccagctggtg
ctggtggccacgcgccgcgcgcgccagctgatcaacggcgcggacgcccacgtgccgcgg
gaaaacgacaagcccacggtgctcgccctgcgcgagatcgccgacggttacgtgaccaac
gccatcctggacgaggaagtggcgccagtcgtactcgaggccaatgaaaacacagccgac
caaccccaaacaggcgggctcgacatcagcccggccgccggcaaagagggcggaaccgag
atctga
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