Sulfuricaulis limicola: SCL_0167
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Entry
SCL_0167 CDS
T05241
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
slim
Sulfuricaulis limicola
Brite
KEGG Orthology (KO) [BR:
slim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slim03009
]
SCL_0167
Enzymes [BR:
slim01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SCL_0167
Ribosome biogenesis [BR:
slim03009
]
Prokaryotic type
ribosomal protein modification factors
SCL_0167
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
BAV32491
UniProt:
A0A1B4XCG6
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All DBs
Position
174992..176350
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AA seq
452 aa
AA seq
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MPKAVSPPPAAPPPGAAAIPRVGFVSLGCPKALVDSERILTQLRAEGYAIAPDYAGADLV
VVNTCGFIDDAVAESLDAIGEALAENGRVIVTGCLGARGDIVKQTHPRVLAVTGPHALEE
VMQSVHAHLPKPHDPYTDLVPPAGIKLTPRHYAYLKIAEGCNHRCTFCIIPSMRGDLVSR
DIGAVLQEAENLVKAGVKELLVISQDTSAYGVDVKYRPGFWHGRPVKTRMTDLARSLGEL
DVWVRLHYVYPYPSVDAIIPLMAEGKILPYLDVPFQHASPRILKLMKRPANAENNLARIE
SWRENCPDITLRSTFITGFPGETEQEFNELLDFLRAAQLDRVGCFAYSAVEGAVANALPD
PVPEEVKQDRLARFMEVQARISADKLQRKVGKTLTALVDSVEGDMAVARSSADAPEIDGV
VYVEGAGHLNPGDFCQVRITRAGEHDLWAKPV
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggcagtttctcccccgccggcggcgccgccgcccggcgccgccgccattccc
cgcgtcgggttcgtcagcttgggctgccccaaggcgctggtggattccgagcgcatcctc
acacaattgcgcgccgagggttacgcgatcgcgcccgattacgccggcgccgacctcgtg
gtggtcaacacctgcggcttcatcgatgacgccgtcgcggagtcgctcgatgccatcggc
gaggccctggcggagaacgggcgcgtgatcgtcaccggctgtctcggcgcccgcggcgat
atcgtcaagcagacccatccgcgggtgctggccgtcaccggcccgcacgcgctcgaggag
gtcatgcagtcggtgcacgcgcacctgccgaaaccgcacgatccctacaccgacctggtg
ccgccggccggcatcaagctcacgccgcggcactatgcctatctcaagatcgccgagggc
tgcaatcaccgctgcacgttctgcatcatcccctcgatgcgcggcgatctcgtcagccgc
gatatcggcgcggtgttgcaggaagcggaaaatctggtcaaggcgggcgtgaaggagctg
ctggtgatctcgcaggacaccagcgcctacggcgtggacgtaaaataccgccccgggttt
tggcacggccggccggtcaagacgcgcatgactgatctcgcgcgctctctgggcgagctg
gacgtgtgggtgcggctgcattacgtctacccctatccgagcgtggacgcaatcatcccg
ctcatggcggagggcaagatcctgccctacctcgacgtgccgtttcagcacgccagcccg
cgcatcctcaagctcatgaagcgcccggcgaatgccgagaacaatctcgcgcgcatcgag
tcctggcgagagaattgtcccgacatcacgctgcgctcgaccttcatcaccggttttccc
ggcgagaccgaacaggagttcaacgaactgctcgatttcctgcgcgcggcgcagctcgac
cgcgtgggttgtttcgcctattcggctgtggagggtgccgtggccaatgccttgcccgac
ccggtgcccgaggaggtcaaacaggaccgcctggcgcgcttcatggaagtacaggcgagg
atttccgccgacaagctgcagcgcaaggtcggcaagaccctgaccgcgctggtggacagt
gtcgagggcgacatggcggtggcgcgttccagcgccgatgcgcctgagatcgacggcgtg
gtttatgtggaaggcgccggccacctgaaccccggcgatttctgccaggtccgcatcacc
cgcgccggcgagcatgacctgtgggcgaaaccggtttag
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