KEGG   Sulfuricaulis limicola: SCL_0390
Entry
SCL_0390          CDS       T05241                                 
Name
(GenBank) hypothetical protein
  KO
K12287  MSHA biogenesis protein MshQ
Organism
slim  Sulfuricaulis limicola
Brite
KEGG Orthology (KO) [BR:slim00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:slim02044]
    SCL_0390
Secretion system [BR:slim02044]
 Type II secretion system
  MSHA pilus biogenesis protein
   SCL_0390
SSDB
Motif
Pfam: DUF6701 YbbD_head
Other DBs
NCBI-ProteinID: BAV32712
UniProt: A0A1B4XD50
LinkDB
Position
386071..390021
AA seq 1316 aa
MNVMSPVSEKRDLSPFAGNVFTLLLLTLGFVMIIANPAQAAPPAFQAAGTAVGGNGNITT
LTWPAHQVDDIALLFVESTGGEPVALSNNTAGFVAVANSPQATGTGTNGTRISVFWARAT
SNSMTAPQVDDPGNHAYAQIITYRGVIATGNPWDVTGGGVKATASTSITVTGVTTTVPDT
LIVQVAAHDRDNTGAHFSGQTNANLTGIAERSDAGTTQGNGGGFAVWDGVKATAGATGNT
TATLSNSVVNAFLTIALKPRLLSVDSISLASTNPTEPGVSVSWTVTFSASVTGVDATDFA
LVQAGGVSGASITSVTGGGTSWTVTANTGSGTGTLGLNLVDNDSIIDAGSIPLGGAGAGN
GNFTGQVYTVSPPFCSPPSNVPAGVSVSCVCDRFGRASLNPSTIFGGNWTVSLGSTDATG
ILPDINATTGLLRLTESSANNAKAATVPGIFPAAGNYISVEFNHYAYDGTGADGIAVTLS
DYSVPAVPGGFGGSLGYAQRSDGTQPPGFNGGWVGIALDEYGNFQSSTEGRVLGACGTAA
CRPQSVGVRGPGSGANGYRWMGGTGSSPGGLTIDNRTSTTPSPGYAYQVIVDARNSASGT
INVSVNRDATTKDGSNYVSLFGPFNAYTEADYAMSQGWIPQIVPDYWKISFTGSTGGSDN
IHEIGGLRVCAQTVLPPTGGTASGFSAIDEAYPGAPTVPAYQNFQTGDIYMKLTGVAFRL
WVAALSGSGISTGYSATSAKYVSVKIVDNSDNACGTDAARTCNAACTSKAAVEAGATQIA
TFASGGTTGVASPSPQFTLNSAWKNLIAVMRECTTSACSAFTATAPACSADSFSVRPTGV
TVASTNATNSTTGGTPIFKAGSDTFNLTATIAGIAGNPSRYTGTLKINSTAMQALHSPSV
LGVLAGTFPAAVSGTPAATATGNNFTYDEAGGFIFRGYNPASDATARRGIYDGVVATTEC
ASLTLAQCDLLRLATWTGIDSVSTKANCVSSNYSNTKDASGKYGCLFGLTADSAGIGRFT
PAYFDVTRIHACLGATPFTYSGQPFSQVTVTARAGAGTPTKNYNGTTGLAKLVTLSDGNG
FAGGVFGNGSTTDGSFPAASFTSNGDQTRTDEKYTFTDRETPPVTLALRATDTDNVSSAG
HTEDPAEVRSGRLRIQNAYGSELAALPLPMRAEYYVDTTITAPATTPSIIGWITNSADTC
SSAALNALSNFQGNLNSGETCVQDTGNPGVSGQGCAVAGLPADRYTSPPAAGSYNLNLKA
PGAGNDGSVDISANLSTRPWLRFDWNGTGDTDPSGRASFGLYRGSPRHIYFRQRFN
NT seq 3951 nt   +upstreamnt  +downstreamnt
atgaatgtcatgagcccggtttcggaaaaacgtgatctgtccccgttcgcgggcaatgtt
ttcactttgctcctgttgacgctgggatttgtcatgatcatcgcgaacccggcacaggcg
gcgccgcccgctttccaggcagcgggaaccgcggtcggtggaaacggaaatatcaccacg
ctgacatggccggcgcaccaggtagacgacatcgctcttttgttcgtcgagagcacggga
ggcgagccggtcgctctttccaacaatacggcaggattcgttgcggtggccaacagtccg
caggcaacgggcacgggcacgaatggaacgcgtatctcggtgttctgggcgcgcgcgaca
tccaactcgatgaccgcgccgcaagttgacgacccgggcaaccatgcctatgcccaaatc
atcacctaccgcggcgtcatcgctaccggcaatccctgggacgtcactggcggcggcgtc
aaggcaacggccagtacgtcgatcacggtcaccggcgtcaccaccaccgtgccggatacg
cttatcgttcaggttgcggcgcatgaccgcgacaacaccggggcacatttcagcggacag
accaatgcgaacctgacgggcatcgccgaacgatccgacgccggaacgactcagggtaac
ggcggcggtttcgcggtgtgggacggcgtcaaggcaaccgccggcgcgaccggcaacacc
acggcgaccctgtccaactccgtggtcaacgccttcctgaccatcgccctcaagccacgg
ctgctttccgtggattcaatcagcctggccagtaccaatccaaccgagccgggcgtttcc
gtatcctggacggtaacgttcagcgcgagcgtgaccggtgtcgatgccacggatttcgcg
ctggtccaggccggcggcgtttcgggcgccagcatcacctcggtgaccggcggcgggaca
tcatggacggtgacggcaaataccggcagtggtaccggcaccctgggtttgaatctggtc
gataacgattcgatcatcgatgcgggcagcattccgctcggcggcgcgggcgccggcaac
gggaattttaccgggcaggtctacaccgtctctccgcccttctgttcgccgccgtccaat
gttcccgcgggtgtttcggtgagctgtgtatgcgaccggttcggccgcgccagtctcaat
ccctccaccattttcggcggcaactggaccgtatccctgggctcaaccgatgcaaccggc
atcctccctgacatcaatgccaccaccggtttgctgcgtctgaccgagagcagcgccaat
aacgccaaggccgccacggtgccgggcatcttccccgccgccggcaactacatctcggtg
gaattcaatcattacgcttacgatggcaccggcgccgacggcatcgcagtcacgctctcc
gattattccgtgcccgccgtgcccggcggtttcggcggttcactgggctacgcgcaacgc
agcgatggcacccagccgccgggtttcaatggcggttgggtcggtatcgcgctcgatgaa
tacggcaatttccaaagctcgaccgaagggcgcgtgctgggcgcatgcggcaccgcagcg
tgccgcccgcaatccgtaggcgtgcgtggtccggggagcggcgccaacggttatcgctgg
atgggcggtacgggcagcagtccgggcggcctgacgatcgataatcgtacttccaccacg
ccgtcgcccggatacgcttatcaagtgatcgtcgacgcccgcaacagcgccagcggaacg
atcaatgtcagtgtcaaccgggatgccacgaccaaagacggcagcaactacgtttccctg
ttcgggccgttcaatgcctacaccgaggcggattacgccatgagccagggctggatcccg
cagatcgtgccggactactggaagatttcctttaccggctccaccggcggctcggacaac
attcatgaaatcggcggcctgcgcgtctgcgcccagacggtgctgccgcccactggtggc
acggcgagcggattttccgccatcgacgaggcctatccgggggcgcccaccgtgccggcc
taccagaatttccagaccggcgatatctacatgaagctgaccggggtggcgttccggctc
tgggtggcggcgctatccggctccggcatctcaaccgggtattccgccaccagcgccaag
tacgtgtcggtgaagatcgttgacaacagcgacaacgcttgcggcaccgatgccgcccgc
acctgcaatgccgcttgcaccagcaaggccgcggtggaagccggcgccacccagatcgcc
accttcgcttcgggcggcaccaccggtgtggcctcgccgtcgccgcagttcacgctcaat
tcggcatggaaaaatttgatcgccgtcatgcgcgagtgcactacgtcggcctgcagcgcc
tttaccgccaccgcgccggcctgctcggcggattcgttctcggtgcggccgaccggtgta
acggttgcctctaccaatgccaccaacagcaccacgggtggcacgcccattttcaaggcc
ggcagcgacaccttcaacctgaccgcgaccatcgccgggatcgccggcaatcccagccgc
tataccggcactctcaaaattaacagtaccgccatgcaggcgctgcactcgccctcggtg
cttggggtgcttgcgggtacttttcccgccgccgtgtcgggcacgccggccgcaacggcc
acgggcaacaacttcacgtacgacgaagcgggcgggtttatttttcggggatataacccg
gcgagcgacgccacggcacgaagaggaatctatgatggtgtcgtcgccacgaccgagtgc
gcgtcgttaacgctggcgcagtgcgacctcttgcggctcgctacctggacgggaattgac
agcgtcagcaccaaggccaactgcgtctcgagcaattattcgaacaccaaggacgccagc
ggcaagtacggctgcctgttcggcctcaccgccgacagcgcgggcatcggccgctttacg
ccggcctacttcgacgtcacccggattcatgcctgtcttggagcgacacccttcacctat
tccggccagcccttctcacaggtgacggtgaccgcgagagcgggtgcggggacgccgacg
aagaactacaacgggaccaccggtttggccaagctggtcacgctttccgacggcaatggt
ttcgccggcggagttttcggaaatggatctactactgatggatcttttcctgccgccagt
ttcaccagcaatggcgaccagacgaggaccgacgagaagtatacgtttacggacagggaa
accccgccggtgacgctggccttgcgtgcgaccgacacggacaacgtcagctccgccggc
cacaccgaggatcccgccgaggtccgcagcgggcggctgcgcatccagaacgcctacggt
tccgagctggcggcgctgccgttgccgatgcgagcggaatactacgtggatacgaccatc
accgcgccggcgaccactccctcgatcatcggctggatcacgaacagcgcggacacctgt
tcatctgccgcgttgaatgccttgtcgaattttcaggggaatttgaactctggtgaaacg
tgcgtgcaggatacgggtaatccgggtgtcagcggccagggctgcgcggtcgcgggcctc
cccgccgatcgttatacctcgccgcccgccgccgggagttacaacctgaatctgaaagcc
ccgggggcaggcaatgatggcagcgtggacatcagcgccaatctgtcgaccagaccctgg
ttgcgttttgactggaatggcacgggtgacaccgatccgtccggacgtgccagtttcggt
ctgtatcgcggcagtccgcggcatatttatttccggcagcgctttaactga

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