Sulfuricaulis limicola: SCL_0423
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Entry
SCL_0423 CDS
T05241
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
slim
Sulfuricaulis limicola
Brite
KEGG Orthology (KO) [BR:
slim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slim03400
]
SCL_0423
DNA repair and recombination proteins [BR:
slim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
SCL_0423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
AAA_22
ResIII
AAA_10
TrwB_AAD_bind
SLFN-g3_helicase
T2SSE
AAA_30
Hydrolase
AAA_7
AAA_19
CbiA
AAA_6
Motif
Other DBs
NCBI-ProteinID:
BAV32745
UniProt:
A0A1B4XD91
LinkDB
All DBs
Position
complement(418538..420016)
Genome browser
AA seq
492 aa
AA seq
DB search
MTEPLPIAKSREWIHLLPKMANRHGMIAGATGTGKTVTLQVMAERLSAIGVPVFMADVKG
DLAGVSQKGGGNPKVEERVKLLKPEGFAYQGFPVTLWDVFGEQGHPVRATVSEMGPLLLS
RLLNLNDTQEGVLNLIFKIADDNGWLLLDLKDLRSMAQHVGDNAKDFTTAYGNISGASVG
AIQRALLTLENQGAEKFFGEPALNLDDLMQTQDGRGVINILAADRLMQSPKVYATFLLWL
LAELFEQLPEVGDRDKPKLVFFFDEAHLLFDDAPTALLEKIEQVVRLIRSKGVGVFFVSQ
NPLDIPDQVLGQLGNRVQHALRAFTPRDQKAVRAAAETFRANPKLKIESVITELGVGEAL
VSLLDEKGSPGIVERAFVCPPQSRLGPLSAAERQGLLDASAVKGQYEKTVDRESAYEILK
QRAAQTAVPAAAAPEKSGGGLLDSLLGSTGPRGGRREGAAEAMVKSAARSIGSQIGRNLI
RGVLGSLLGGKR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaccgctgccgatcgccaaaagcagggaatggattcacctcctgccgaaaatg
gccaaccgccatgggatgattgcgggcgccaccggcaccggcaaaaccgtcacgctgcaa
gtgatggccgagcgcttgagcgccatcggcgtgccggtgttcatggccgacgtcaagggc
gacctggccggcgtcagccagaaaggcggcggcaatcccaaggtggaagaacgcgtcaag
ctgctgaagcccgagggcttcgcctaccagggattcccggtaacgctgtgggacgtgttc
ggcgagcaggggcacccggtgcgcgccacggtctccgagatggggccgctgctgctgtcg
cgcctgctcaatctcaacgacacgcaggaaggcgtgctcaatctcatcttcaaaatcgcc
gacgacaacggctggctgctgctcgacctcaaggacctgcgcagcatggcccagcatgtc
ggcgacaacgccaaggacttcaccaccgcctacggcaacatttccggggcttcggtcggc
gccatccagcgcgcgctgctgacgctggagaaccagggcgcggaaaagtttttcggcgaa
ccggcgctgaacctcgacgacctgatgcagacgcaggacggtcgcggcgtgatcaacatc
ctcgccgccgacagactcatgcagtcgcccaaggtctatgccaccttcctgttgtggctg
ctggcggaattgttcgagcagttgcccgaggtcggcgaccgcgacaagccgaaactggtg
tttttcttcgacgaggcgcacctgctgttcgacgacgcgccgacggcgctgctggaaaag
atcgagcaggtcgtgcgcctgatccgctccaagggcgtgggtgtgtttttcgtgtcgcag
aatccgctcgacatcccggaccaggtgctgggccagctcggcaaccgcgtgcagcacgcg
ctgcgcgccttcacgccgcgcgaccagaaagcggtgcgcgccgcggccgaaacctttcgc
gccaaccccaaactcaagatcgaatccgtcatcaccgagctgggcgtgggcgaggcgctg
gtgtcgctgctggacgagaaaggcagtccgggtatcgtcgagcgcgccttcgtctgcccg
ccgcagagccggctcggtccgctcagcgccgccgagcgccagggcctgctcgacgcctcc
gccgtcaagggtcagtacgaaaaaaccgttgatcgtgaatcggcctacgaaatcctgaag
caacgcgcggcccagactgctgtgcccgctgccgcggcgcccgaaaaaagcggcggcgga
ttgctggacagcctgctcggctccaccggtccgcgcggtggccggcgcgaaggcgcggcc
gaggccatggtcaaaagcgcggcccgctccatcggcagccagatcggccgcaacctgatc
cgcggcgtgctgggttccctgctgggcggcaagcgctag
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