Sulfuricaulis limicola: SCL_0576
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Entry
SCL_0576 CDS
T05241
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
slim
Sulfuricaulis limicola
Brite
KEGG Orthology (KO) [BR:
slim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slim03016
]
SCL_0576
Enzymes [BR:
slim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SCL_0576
Transfer RNA biogenesis [BR:
slim03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SCL_0576
Prokaryotic type
SCL_0576
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
BAV32898
UniProt:
A0A1B4XDN3
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All DBs
Position
569984..570772
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AA seq
262 aa
AA seq
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MRIAAILEYDGSAFSGWQRQEQARSVQAAVEAALSKVADQPIHVTVAGRTDAGVHALAQA
LHFDTSAMRSEYSWVRGTNTHLPPDVALLWAAPVDEGFHARYSATGRHYHYIILNRPVRP
TYLARRVTHEYRLLDVAPMQAAAKHLIGEHDFTSFRAIECQAKSPVRVLRALEVQRHGEF
VHIRAHANAFLHHMVRNLAGVLMTIGAGEREPGWAREVLEARDRRAGGVTASPDGLYLAS
VTYPAAAGIPDLARGMAFPDMN
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgccgcgattctcgaatacgacggttcggccttctccggctggcaacggcag
gagcaggcgcgttcggtgcaggccgccgtcgaagcggccttgtccaaagtagcggaccag
ccgattcacgtgacggtggccgggcgcaccgacgccggcgtgcacgcgctggcgcaggcg
ctgcacttcgacaccagcgccatgcgcagcgaatattcctgggtgcgcggcaccaacacg
cacctgccgccggacgtggcgctgctgtgggctgcgccggtggacgagggcttccacgcg
cgttattccgccaccggccggcattatcattacatcatattgaatcgcccggtccggccg
acgtatctggcacggcgcgtcacgcatgagtaccgcctgctcgacgtggcgcccatgcag
gcggcggcgaaacacctgatcggcgaacacgatttcacgtcgttccgcgctatcgagtgc
caggccaaaagcccggtgcgcgttttacgcgcactcgaggtgcagcgccacggcgagttc
gtgcacatccgtgcccatgccaacgccttcctgcaccacatggtgcgcaacctggcgggt
gtgctcatgaccatcggcgccggcgagcgtgaaccgggctgggccagggaagtgctcgag
gcccgtgaccgccgggccggcggcgttaccgcatcgcccgacggtctttatctggcatcg
gtcacgtatccggccgcggccggcatccctgatctggcccgggggatggcatttccggat
atgaattga
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