Sulfuricaulis limicola: SCL_0618
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Entry
SCL_0618 CDS
T05241
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
slim
Sulfuricaulis limicola
Brite
KEGG Orthology (KO) [BR:
slim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slim03021
]
SCL_0618
Transcription machinery [BR:
slim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCL_0618
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
GntR
KORA
WXG100
Motif
Other DBs
NCBI-ProteinID:
BAV32940
UniProt:
A0A1B4XDR3
LinkDB
All DBs
Position
complement(607934..608800)
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AA seq
288 aa
AA seq
DB search
MTQAMTQALTLPINLYPEKGLSAYLRAVNALPVLSVSEERKLARRYHKHNDLDAARQLVL
SNLRYVARIARGFSGYGLPQADLIQEGNIGLMKAVKHYDPARKVRLMSFAVHWIKAEIYD
YILRNWRIVKVATTKAQRKLFFNLRKSRDRLGWMTRGEVDALAENLDVSPEAVQQMEGRM
SHFDVAFDADNDADDDNFHAAPAGYLQDMRYNPEVLATQSDQEDSRHTQLRQALSTLDAR
SRDIIQRRWLDEDKPTLHELAAEYGISAERIRQIESKALDVMKGTLEA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgacacaggccatgacccaggcactgacattgcccatcaatctctaccccgaaaagggg
ctgtcggcctatttgcgggccgtcaatgccctgccggtcctcagcgtgagcgaggaacgc
aaactggcgcggcgctaccacaagcacaacgatctcgacgcggcgcggcagctggtgctg
tcgaatctgcgctatgtcgcgcgcatcgcgcgcggcttctccggctacggcctgccgcag
gcggacctgatccaggaaggcaacatcggcctgatgaaggcggtcaagcattacgacccg
gcgcgcaaggtgcgcctgatgtcgttcgccgtgcactggatcaaggccgagatctacgac
tacatcctgcgcaactggcgcatcgtcaaggtcgcgaccaccaaggcgcagcgcaagctg
ttcttcaacctgcgcaaatcacgcgatcgcctcggctggatgacgcgcggcgaagttgac
gcgctggcggaaaatctcgacgtatcgccggaagcggtgcagcaaatggaaggccgcatg
agtcacttcgacgtcgcgttcgacgccgacaacgacgccgatgatgacaatttccacgcc
gcgccggccggctacctgcaggacatgcgctacaaccccgaggtgctggccacgcagtcc
gaccaggaagattcgcggcacacgcagctccggcaggcgctgtccacgctcgatgcgcgt
tcgcgcgacatcatccagcgccgctggctggatgaggacaagcccacgctgcatgagctg
gcggcggaatacggcatttcggccgagcgcattcgtcagatcgaatcgaaggcgctggat
gtgatgaagggcacgctcgaagcgtaa
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