Sulfuricaulis limicola: SCL_0794
Help
Entry
SCL_0794 CDS
T05241
Name
(GenBank) diguanylate phosphodiesterase
KO
K21025
multidomain signaling protein FimX
Organism
slim
Sulfuricaulis limicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
Response_reg
PAS
PAS_8
Motif
Other DBs
NCBI-ProteinID:
BAV33114
UniProt:
A0A1B4XE80
LinkDB
All DBs
Position
complement(782994..785231)
Genome browser
AA seq
745 aa
AA seq
DB search
MEKKILRLLIVDDSPDDAELAVASLRKAGFMLKNQRVQDLASMQTALDKGTWDVVLSEYT
LPHFGAQLALDLVKRAHLDIPFLVVTRNIRDPDLVKIMRNGAHDVVLKSQSARLAPAVER
ELHVAEERRKYQKMSLTLNEVENKNRAIIEGSREAICYCQDGMHIDANKTYLDMFGYEDL
TELEGVPLMNLVAKSDHVRFKDFLRKINSPNPPEPQEFLAAKKDGQHFHAELAISPIVLN
GENCTQCVVIDVSKRKAVENRLQYLNQHDPLTGLFNRHHFTQELTRTLEKAKQDGSQSAL
LYLDLNELKEINDSLGHAAGDRLLLKIARLFRDKLGDSTILARFSGDEFTALLHDMSESQ
IKESVAALLASLKDTTFSEGGKTFRCDGTIGVVVIDKHCESAQAVLNKAYQTCQGSRPSR
PAPVVVAPAPEPVPIPAPASRPVPVTEAPAAAEVPALAPIPTLTEIRRPAPSVSMNAEQD
WEGRLKTALEKDGFQLAYQPTVNLHGDPAEYFEVLLRLAGRNGELIHAGEFMPAAEQLGL
LTTIDHWVIRQSVQSLAALHRDGRKASFFVNLSPVSLGDPELLTMLQKEITAARLKPKYL
VLEADESAVMENPSDAAMFMQAVKRIGCRFAVDNFGNNLSTLNRLREMPVDFLKISGSLI
RNLSTDVLTRTSLKAIIDLAKSMNKQTIAKFVEKADDLGVLWNLGFDYVQGNYFQQADAH
TDYTFADEATLASDTGTPNWANSRR
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaaagatattacgcctgctgatcgttgacgactcaccggatgacgccgagctg
gccgtagcctcgctgcgcaaggccggtttcatgctcaagaatcagcgcgttcaggacctc
gcctccatgcagacggcgctcgacaagggaacctgggacgtggtgctgtcggaatacacg
ctcccgcatttcggcgcgcaactggcgcttgatctggtgaagcgcgcgcatctcgacata
cccttcctcgtggtcacccgcaacatccgcgatccggacctggtcaagatcatgcgcaac
ggcgcgcacgacgtggtgctgaaaagccagtcggcgcgtctcgcgcccgccgtcgagcgc
gagctgcacgtggccgaggaacgccggaaataccagaagatgtcgctgacactgaacgag
gtggagaacaaaaaccgcgccatcatcgaaggctcgcgcgaggccatctgttactgccag
gatggcatgcacatcgacgccaacaagacctacctcgatatgttcggctacgaggatttg
accgaactcgaaggcgtccccctgatgaacctggtcgccaaatccgatcacgtgcgtttc
aaggattttctgcgcaagatcaactcgccgaatccacccgagccgcaggaattcctggcg
gcaaaaaaggatgggcagcattttcacgcggagctggcgatttcgccgatcgtgctcaac
ggcgaaaactgcacacagtgcgtcgtcatcgacgtgtccaagcgcaaggccgtcgagaac
cgcctgcaatacctgaaccagcatgatccgctcaccgggcttttcaaccgccatcacttc
acccaggagctgacccggacgctggagaaggcgaaacaggacggcagccagagcgccctg
ctctatctcgatctcaacgagctcaaggaaatcaacgacagcctcggccacgccgccggc
gaccgcctgctgctcaagatcgcgcgcctgttccgggacaagctcggtgattcgacgatt
ctggcgcgcttcagcggcgacgagttcaccgcgctgctgcacgatatgagcgagagccag
atcaaggaatccgtggccgcgctgctcgcctcgctcaaggacaccaccttcagcgagggt
ggcaaaaccttccgctgcgacggcaccatcggcgtggtggtgatcgacaaacactgtgaa
agcgcgcaggcggtgctgaacaaggcgtatcagacctgccagggcagccggccgtcccga
ccggcgcctgtggtggtcgcgcctgccccggagccggtaccgataccagccccggcttcc
agaccggtgccagtgaccgaggcgcccgccgcggcggaggtaccggcgctggcgccgatt
cccaccctgaccgaaattcgccggccggcgccgtccgtgtccatgaacgccgaacaggac
tgggagggacgactcaaaaccgcgctggagaaagacggcttccagctcgcctatcagccc
accgtcaatctccacggcgacccggcggagtatttcgaagtgctgttgcgactcgcgggg
cgcaatggcgaactgatccatgccggcgaattcatgcccgccgcggaacaactgggattg
ctgacgactatcgatcactgggtcatccgccagtcagtgcaatcgctcgccgcgctgcat
cgtgacggccgcaaggccagcttcttcgtgaatctgagcccggtatcactgggcgatccc
gaattgctcaccatgctccagaaggagatcaccgccgcgcgcctcaaaccgaaatatctg
gtgctcgaggccgacgaatcggcggtcatggagaacccgtcggacgcggccatgttcatg
caggccgtcaagcggatcggctgccgcttcgcggtcgacaatttcggcaacaacctgagc
acgctcaatcgcctgcgcgaaatgccggtggattttctcaagatatcggggtcgctgatc
cgcaacctgtcgaccgatgtgctgacccgcacctcgctcaaggccatcatcgatctggcc
aagtccatgaacaagcagaccatcgccaagttcgtcgagaaagccgatgatctcggggtg
ttgtggaacctcggcttcgattacgtgcagggcaactacttccagcaggcggacgcccac
accgattacaccttcgccgacgaagccacgctcgcctccgacaccggcacgcccaactgg
gcgaattcccgccgctga
DBGET
integrated database retrieval system
